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Mutant Lines
12-3328-1

12-3328-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 20698694 [Map]; Strand: c
  - AT1G55430.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 12-3328-1 - 5-prime edge
```
CCTTCAACCT GGTGATTTCT CTTGTGGACT TTGTCGCCAT ACAGTTGACG 
TTAACTGCGG GCAATACTCT TGTGATAAGG GATGCCAATA TGCTATCCAT 
TCGAAATGTG CAACATGGAG AGACGTGTGG GATGGAATAG ATC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 20683007 [Map]; Strand: w
- AT1G55390.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

NGGNNTTGNA ANTGATGACT NNNATCGGAN ANGCCGGGCA GNCGANCNCN 
NGNGCTGCTA NAAANGCGAT GCCNNANACA GTCACAGGGC CNANAGCCNA 
TAGTAGTGNC NGTTTAACAA TTAGCGTNCA CAGNCATANC GATGCGCATA 
GGAAGGCNAG GANGANATCT ATANGTGNTA CTCTCACNNT NGTANTTNCA 
TACNGGCTTG TCNCANNACG NTNGGAGGGN GNGNAGACAN ANNNTTGCAC 
CGGGCTGANC NTACTCACCA GTGCTCTGNG TTACNANNTG GCATNGNNAT 
NNNTAAGATA CCNNGCATTA CCGACGACAG CTTCGGGGCT TCAGAAGGAN 
CNATAANNGA AACTGACGAG GATGATGACT GTGAANACGG NGGCCATGAT 
GATGAANATA ACANTNTTGN NGACGANGAT GNNATTGNTA ATGATGGNGA 
TGGNGNNNGN GANNANNNNN ANNGANNGNN NGGGANGGNN NNGGNNG

AT1G55390.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55420.1); Has 11745 Blast hits to 4394 proteins in 388 species: Archae - 57; Bacteria - 4511; Metazoa - 1535; Fungi - 633; Plants - 1887; Viruses - 132; Other Eukaryotes - 2990 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G55430.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55420.1); Has 1374 Blast hits to 579 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1370; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR