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Mutant Lines
12-3366-1

12-3366-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 23779111 [Map]; Strand: w
- AT1G64065.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
  Distance: 0; Region: exon1 (CDS)
- AT1G64070.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: -838; Region: promoter

TNAGACGGTC TAGGATAACC GGTGTTGTAA CTCGAGATCG GTTCGTTTCG 
GTTATTGGAT ACTAAGGATT TGGATAAGGA TTTGAGATTA GGGTTTTTGG 
AGTTGAGAAG TGTTGCNTGA GGTTAGAGGA AGGATTAAGG TTTTGGGAAG 
AAAAAGATGG AAAGTTAGTG TGATGAGTTG TACCATGAGA CTAAATTTAA 
CCGGTCGGTT TATTCAAAAT TTGTTATGTG AATAGTAGTG ATTGATTGAT 
CGGTTTCATG ATCCGGTTTA AGAAGATTTA TTTGTTTGTT GTTTTTTTTT 
GGGGGGTNGG GTTTTTNCGG AATTGNAATN GCTTTGGNCT TTGNATNTNA 
ACGGAACATA ANTTTTGTCC AAAAAAAAAT TGGCCCCTNC AAAATNGNTT 
NGNAAAATAA NTAANTAAAT TGATTANTNT GANTTNGTAG GATCATCATT 
NNGANAAANC CNAATGANNA AACCTAAAAC TNTCCCCAAT NCTTTAACNT 
NTTAAANGGG GAAATAAAGT GGGAAACTTN TCAANCCCCC NTGTTGACCC 
NTTNATNCTT GTNCCCCCAA AATCGACATC CGNNTCCNNC CCCTATATTA 
AANAGNTTTT TTNAAACTTT TTTTTTTTNG GGNNAAAAAT NNNCCCTTTT 
NGGNNTTNCN CCTNTTNNGG ACCNTACCCC NNTTTCCCNC NNANNANANA 
AANAACNNTN NNT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 23779043 [Map]; Strand: w
  - AT1G64065.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
    Distance: 0; Region: exon1 (CDS)
  - AT1G64070.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: -906; Region: promoter
Flanking Genome Sequence: 12-3366-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
TCTTATGAGC TTCCACTCTT CTCCCTTCAA TCTTGGTCTC TCCCACAACA 
CCATGATCAG CGTAAACAAC ACGTAACGTA CTATCCTCAA ATTCAAACGC 
GCCAAAATTC GAGTTTCTGA TCGAGATATC ACTTACTAGC GTGGCAGTTG 
AAGTAAGGGT TTGTTGAATT ACCTCCCGAT CGTAGATC
```

AT1G64065.1

Model type: Protein coding
Short Description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G46150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G64070.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Curator Summary: Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.
Computational Description: RESISTANCE TO LEPTOSPHAERIA MACULANS 1 (RLM1); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: defense response to fungus, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sepal, flower, carpel, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G16870.1); Has 18146 Blast hits to 14776 proteins in 597 species: Archae - 15; Bacteria - 1058; Metazoa - 1168; Fungi - 58; Plants - 15498; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).
Link: InterPro Scan - TAIR