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12-3368-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22252796 [Map]; Strand: c
      • AT3G60210.1 - [+] show detail - GroES-like family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-3368-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGCATTT 
    TNCCATCCTA CTTTCATCCA NGAAGCACGA GCAGAATCTC CTCAACTTCC 
    CCAACCTAAT AGCTCGCCGT GTCGTGACTA CTCACCGAGT AGGAACCTAA 
    CCTTATCCAA TGGCTTCGAG TTTCATTACA GTACCTAAAC CCTTCTTGTC 
    CTTCCCCATC AAAACCAATG CTCCTACTCT ACCTCAGCAG ACCCTTCTCG 
    GTACAAATCT TAATCCATGT TTCTTTGTTT TCTGGATTAG CTTCTCTTTT 
    GTCTGTGTCT TCCCCATCAT TGATTCCTTT CTTGTTTACG GATTTCTATA 
    GGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22252804 [Map]; Strand: c
      • AT3G60210.1 - [+] show detail - GroES-like family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-3368-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TTGTTGGACA AACCTTTCTT CTACAGACTT CTCTTGATGC TTCCTTCCTT 
    GTGTGCTTTG TTTGATTTAG TTTGGGCCTA ACTATGTTGG CCCGAATACT 
    TTTGCTTCTC ATCTTTGAAA GCTAGTTCTC TTAATACNGG TTTTGAAGAA 
    AATATTTTAA AATTTTAACA CNTTAGAAAA AAACAAAATT GTTGAAAAAA 
    ATAAAATAGA AGTTTTAAAA CATTTTTAAA TAAAAACAAT TTGGATGTTG 
    TGTACAATTA GTTTAGACAA AAATTTAGAA TTTAACACTT CAAAAAAACC 
    TTTAAACTTT AATAGTGATA AAAAAAAAAA ANNTTNAAAA NNAANNNTNA 
    AAANTNAAAN TTTNNNNNAA NCCNNAAAAA GGGGCCTNCN TTNNTNCNNT 
    NGGGNCNAAT CTNTTTNCNT TNNAAAANNT TNCCCCTNNC AANNGGNAAA 
    NGGNTNNCCA CCCGGGNCCG NNANCNNCCN NGCCCNTTAA A

AT3G60210.1

Model type
Protein coding
Short Description
GroES-like family protein
Computational Description
GroES-like family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn10 (InterPro:IPR020818), GroES-like (InterPro:IPR011032), Chaperonin Cpn10, subgroup (InterPro:IPR001476); BEST Arabidopsis thaliana protein match is: chloroplast chaperonin 10 (TAIR:AT2G44650.1); Has 3302 Blast hits to 3296 proteins in 900 species: Archae - 7; Bacteria - 1960; Metazoa - 11; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 1153 (source: NCBI BLink).
Link
InterPro Scan - TAIR