1. Home
  2. Mutant Lines
  3. 12-3382-1

12-3382-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23440116 [Map]; Strand: w
      • AT3G63470.1 - [+] show detail - serine carboxypeptidase-like 40
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-3382-1 - 5-prime edge 
    CCGGCCACTA TGTTCCGCAA CTTGCCCATA CTATCCTTCT CCATCACCGG 
    AGCTTCTTCA ATCTCAAGGG CATTCTGATA GGAAATGCGG TGATCAACGA 
    CGAGACCGAC TTGATGGGTA TGTACGACTT TTTCGAGAGT CATGCTTTGA 
    TCTCCGAAGA TTCTTTGGCT AGACTCAAGA GCAACTGCGA TCTCAAGACG 
    GAGTCTGCGA GTGTAATGAC TGAGGAGTGC GCGGTGGTGT CCGACCAAAT 
    AGACATGGAT ACATATTACC TCGACATCTA CAACATATAC GCTCCCTTGT 
    GCCTCAACTC CACGCTCACT CGCAGGCCCA AGCGAGGAAC CACAATAAGG 
    GAGTTTGACC CCTGCAGTGA CCATTACGTG CAGGCCTACC TGAACAGACC 
    TGAAGTCCAA GCGGCCCTGC ACGCAAACGC TACGAAGCTG CCTTACGAGT 
    GGCAGCCGTG CAGCAGTGTG ATAAAGAAGT GGAACGACAG TCCTACCACA 
    GTGATTCCTC TCATCAAGGA GCTGATGGGT CAGGGCGTCC GCGTCTGGGT 
    GTTCAGCGGA GACACAGACG GGAGAATT

AT3G63470.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 40
Computational Description
serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink).
Link
InterPro Scan - TAIR