1. Home
  2. Mutant Lines
  3. 12-3402-1

12-3402-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 11185223 [Map]; Strand: c
      • AT5G29550.1 - [+] show detail - transposable element gene
        Distance: -709; Region: promoter
    Flanking Genome Sequence: 12-3402-1 - 5-prime edge
    AGTATATGCA ATGCAATCGT ATATATTCTT TTTTGAAGAC TTGATGAACC 
    ATTCGCCGTG GGTCCCACCC GCTATGTAGG GATACCCCAT CTAGTCTTAA
    CGGGCTTTGA TGCATGAAAA AATTCGAAAA CAATGCTTGA ACAAGTAATT
    TTGGGTCCGT AATATAGCCC AAATCACGAA AATGCCTGAA AAAGTACTTA
    AATGTCAAAA TTTGGGGTCG ACAAAAAGTC AATGGAAAAG TTCCATTGTC
    CTGCTTCTTT CGTCGGAGGG CTGTCTTTGG GCTTTCCGAA AAGGTATCAC
    ATGCCAAGTT TGGCCTCACG GTCTAAAAGT TATGGAGTCA TAAAGTTTTA
    ACCAAAAAAG AAAAGGTTAA ATATAAAAGA GGGATGCAAC ACGAGGACTT
    CCCGGGAGGT CACCCATCCT AGTACTACTC TCGCCCAAGC ACGCTTAACT
    GCGGAGTTCT GATGGGATC

AT5G29550.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 7.4e-126 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR