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Mutant Lines
12-3415-1

12-3415-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 21690932 [Map]; Strand: c
- AT1G58380.1 - [+] show detail - Ribosomal protein S5 family protein
  Distance: 676; Region: intergenic
- AT1G58390.1 - [+] show detail - Disease resistance protein (CC-NBS-LRR class) family
  Distance: 30; Region: intergenic

GGGATAAACN ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTA 
CAGAGTATGT ACCAGGTTAA CTATGTTTTA TTTGTTTTTT ATAATGGATT 
CAAAAATGAA GTCATTCTAC TATATTTTTA GAGAGGGAAG TAATATTCTG 
CTTAATCTGA TTGCCTTTTT TTTTTTNGNA ANNAACCCNT TTNNNANCCA 
AANCCAAAAN AAANNGGGCC NNNNCCCCCN NNTNCCCNNA AAAACCCNTT 
GNCNTGGTTT TTTGNNGGCC TTTGGGGGNA AAACCAANCN NACCNNTTNN 
NGGGGGGGTT NCNGNNCGGA AAANCAAACC NCNTNACCCC TCANNNCNNN 
AATGGNCTTT TTAAGGTNCC CCTGGGGGGN NNGGGGNAGA AANACCCCNT 
TAAACCCCNT TTTNTTNTTG GGGNGANCCN AAAAACCNNA CCCGGGGTTN 
CNCCAANTGG GGCCNTCCGG GGNNNCNCCN GGNCTTTTTT NAACCCTNNT 
TTTTNTTTTT TTTTTNNNNC CCCCNAAAAA NAAAAAAGGG GGGNNTTNNN 
CAANTTNNNC CCTNCCCCCC CCNCCNCCCC NGGGNTTTTN NANNNTTCCN 
GGGNCCCCCC CCCCCNAAAA ACCCCCCCNA AAGGGGGNGG NGGGGNANCC 
CCCCCCACCC CCTNNGGNNG GGGNTNTTGN CCCCCNNANA AAAAAA

AT1G58380.1

Model type: Protein coding
Short Description: Ribosomal protein S5 family protein
Computational Description: XW6; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane, chloroplast, membrane; EXPRESSED IN: guard cell, pollen tube, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5, eukaryotic/archaeal (InterPro:IPR005711), Ribosomal protein S5, N-terminal (InterPro:IPR013810), Double-stranded RNA-binding-like (InterPro:IPR014720), Ribosomal protein S5, C-terminal (InterPro:IPR005324), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 (InterPro:IPR000851), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Ribosomal protein S5, N-terminal, conserved site (InterPro:IPR018192); BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 family protein (TAIR:AT1G59359.1); Has 10515 Blast hits to 9714 proteins in 2923 species: Archae - 262; Bacteria - 5279; Metazoa - 1538; Fungi - 549; Plants - 325; Viruses - 26; Other Eukaryotes - 2536 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G58390.1

Model type: Protein coding
Short Description: Disease resistance protein (CC-NBS-LRR class) family
Computational Description: Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, LP.08 eight leaves visible, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G58400.1); Has 14341 Blast hits to 13745 proteins in 491 species: Archae - 4; Bacteria - 531; Metazoa - 280; Fungi - 132; Plants - 13314; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
Link: InterPro Scan - TAIR