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12-3437-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6930138 [Map]; Strand: w
      • AT4G11390.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-3437-1 - 5-prime edge 
    ATGGAGATCG CTATAAGGTT TTTCTTCTTT TCCTTAATAA GCAAGATAAA 
    TACAATTAAC TAAACGGACA TAAGAAAGAG ATGGTACTAG TGAGTATATA 
    TAAGCCATGG ACATCTTATA GATTGTAACA TCATGATCTT CTTCTCTTAG 
    GGGGGAAATA AATAAATCCT AATAATCACA TTTTGATTTT GTTTCTGCAT 
    CTAGCTGGTG TGTATGTACT GTAAATATTG CTGCTATGCC TCAACGAATA 
    AGGTACTAAC TCTGAAAAGA CACATATATG GAGGATTTGA AGACCAACGA 
    CTCGAACCCT GACAACAATC CTGAAGCCTC CAAGAAACAA GAGTAAAGGG 
    GTTCCAACTT TTAACTTTAT GTTTAGAGTT ACGAGTCTGA ATTACCANCC 
    CGGGCCGNNN ACCACNCNTG CCCTNTANNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 6930029 [Map]; Strand: w
      • AT4G11390.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-3437-1 - 3-prime edge 
    ATATGAANGT GGCGATGGGA AAATCCCGTA CCGACCGTTC TNGACTACCC 
    GANCTNTGTT AGTTACTATC CCGATCGATT TCGAACCCGA GGTAAAAAAC 
    AAAAACGGAA CGGANACGGG ATATACATTA ACCGGTAAAC CGGAAACAGG 
    AAACGTGTTG AGCTAGTTTN CNNACCGTTN CACCGGGATC ACCNGCCCGG 
    GCCGNNGANC ACNCNTGCCN TATTNNTCGG CNAGTTNTAT AGCCTGNANC 
    TGAATCCCAG AAGAAAAAAA CTCACTCTTT AGTCGTTTAT ACTTCACTAN 
    TATCATGCGT TACTATGAAA CANNAGCNAC AACNTTNATA ANNAGCTCTG 
    AATGACACAT ATTGCCANNG AAATTAAAAT ACCTGCGTTC NATCGTCATC 
    ATCANACTCC TTCTTTGNTG NTTACAAAAC ATATNNAANT CTNNAACTGA 
    ATTCCNATAT NNNTAAAANA ATNCTACCTA TTTNACCCCT TNNNNTNTAA 
    TTATNAATTN TGTTNACTNT GGTTNCCATA TATTNCATNN AAAANTNTNT 
    NNNTNATTTT TNTNCNCCAA AGAAATTNNG ANAATATNCN NTCTNTATTA 
    ANAGNGGTAN ATNNNTNTTT TATTCTATNT NTATAATATN NTNTNCTAAA 
    NNATNACTCT TTATTATGAT TATTTTTTTN GNTANNGNNG NNCTANNCTC 
    AAAAATTTAT NNGNAGANNN NNTNTCCGAA NNNTTTTTTT TNNGATNNCT 
    CNNCNNATNT TNCNATNTCT NNCNTCNCTN ANNNCNCTAT TCATTTTNNN 
    GCCNAATNNT

AT4G11390.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; INVOLVED IN: intracellular signaling pathway; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G11550.1); Has 1109 Blast hits to 539 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1107; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR