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12-3499-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22714032 [Map]; Strand: c
      • AT1G61560.1 - [+] show detail - Seven transmembrane MLO family protein
        Distance: -1988; Region: intergenic
      • AT1G61563.1 - [+] show detail - ralf-like 8
        Distance: 889; Region: intergenic
    Flanking Genome Sequence: 12-3499-1 - 5-prime edge
    GGTNANGCAA NGNGCCCCAC NTGCAGCGCT ACANCNCCGN GCGCGGNTCA 
    CNAACCCGGG CCGNCNACNA NTCGTGCNNT NTAAGTCTAT AACACAGTTT
    TACATGACAT GTTAATGACT AGGGTTTGCC AAAATATATA AATACTTGAT
    TTAGTTAGTT ATATGTCCGA ATCTGTTTTA AATTATCATA CGCCAATCAC
    AAATTCTTTA TCACAATATA CAAACTACAA CACCATATTT CATCATAGTA
    AAACCAAAAT TTAACTACGA ATCTGAACGT AGCCCTGCTT TATGATAAAT
    ATTTCCCGAA AAAAAAATCA TTANAATT

AT1G61560.1

Model type
Protein coding
Short Description
Seven transmembrane MLO family protein
Curator Summary
A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).
Computational Description
MILDEW RESISTANCE LOCUS O 6 (MLO6); FUNCTIONS IN: calmodulin binding; INVOLVED IN: defense response to fungus, incompatible interaction, cell death, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Mlo-related protein (InterPro:IPR004326); BEST Arabidopsis thaliana protein match is: Seven transmembrane MLO family protein (TAIR:AT1G11310.1); Has 556 Blast hits to 535 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 551; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61563.1

Model type
Protein coding
Short Description
ralf-like 8
Curator Summary
Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
Computational Description
ralf-like 8 (RALFL8); FUNCTIONS IN: signal transducer activity; INVOLVED IN: N-terminal protein myristoylation, cell-cell signaling; LOCATED IN: apoplast; EXPRESSED IN: flower; EXPRESSED DURING: rosette growth complete; CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801); BEST Arabidopsis thaliana protein match is: ralf-like 9 (TAIR:AT1G61566.1); Has 33 Blast hits to 33 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR