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12-3533-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11585447 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 4900; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 1069; Region: intergenic
    Flanking Genome Sequence: 12-3533-1 - 5-prime edge 
    TATTTATGTG ATTCTTCGAC ACAAAGAACA CGTAGATTTA CGATTATGCC 
    CTTATGCGTA TATGCTCGAA CGGTGTTATT TTCAAAATTG TGTTTCCCGC 
    TTTGGAGATA TTTAGTTAGA ATCCCATTAA AAACTTTGGA GATAATAGGT 
    TCAATTTGTT CTCAAAAACT AGAGTTGAAG ATGAACCCTT CGTTTAATTA 
    GTAGCAAATT ATCATCTGCT TGCTCTATTT TTTTTTTCNC CNTTTAATTA 
    GNAAATNTNC AANCNTNGTT NATTNAGTTC CCATTTTTTT ACNTNCAATT 
    NTNTNTTTNC AATNTAAATT NGGGAAATTT TNCAAAAATN TTTNGAAAAA 
    TCAANTTAAN GANAGAGANA ANTAAGGCNC ANGAATCTNT NTNGTNCATA 
    ACAAAAAAAA AAANGTTGGG TNGANAAAAA ANCCAANTNG TNNANCNCTT 
    TTNAAGNGAA CNANCNCCCC AAAAAAANCC NGGNGGGNGG NTNTNTATAG 
    TNTNTNTNAA AGGAGNNTTN TGATCGCNTT TAAAANNGAT TAGGGNGTTG 
    CAAAAGGTAA ATGAAATCTT TACNCTGNTA AANTCTGGGC CGGNGTNAAA 
    NAGCCCTATT TTGGGGCATA AGGGACCCCG AAAACAGAGC TCTCTGCCTT 
    TAGGATNCGG GTTTCGGGAA ANAAAGGGGG NNATTNCAAA TTTGGCTTTN 
    AAANAAAAAG TTTTNGGGCN CCAAAAAAAC TNCCACCCCG G

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11585331 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 4784; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 1185; Region: intergenic
    Flanking Genome Sequence: 12-3533-1 - 3-prime edge 
    CATAAATAGC TGATTTCGCA ACGTAAACTC TTCTTCCACA AATAAACCGT 
    CAACGAATAT TCAAATTTCA AAATTCATTT CTAATTTCTT CAAAACGAGT 
    TTGAATTTGA GTGGAGAAGC GATTTTGTTC GTCTATCTTC ATCTGATTCT 
    TTTCTCCGAT CAATTGATTC GTGTTCAATG TCGTCTGATT CGTTGGGTTA 
    GTTCAAATCG GGATC

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR