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12-3548-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 428713 [Map]; Strand: w
      • AT1G02210.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: -902; Region: promoter
    Flanking Genome Sequence: 12-3548-1 - 5-prime edge 
    TTTGGTTAGC TGTATGAGCA GAAATTATAC AACTTTGTCT TCACAATGGA 
    GCATACATAC AAGATGAGAA AGTAACAAAA CAAGATAGAC ATTATTATGT 
    CAATGGATAC AAATTTGTCT TCACAAATTT ACCAGTTTTA TACATATCAC 
    ACATACAGTA TGGTAAAGTT ACAAACCAAG ATAGACATCA TAGCATACAC 
    TTGTACTGTT GTAAATAATT TGGAAAGTAG AAAAGGTGTT ATTGATCACT 
    TTTATTGTTA TCAAGTTCTT GAGATGGAAG AACATAGGTG AATTTTCTTG 
    ACGAATTTTT GTATCATCCT GTGAAAGAAA CCAGCTCTTT TCTTCTTGAT 
    CGTCTCTTGA CCCAATTTAT GCTCACCAAT CTCAGTCCCT TGTGCATCAT 
    CATAAGGATT CTTCTTCTTC TCGGCGGTAT CAATACTGGT TATTAGAGCT 
    TGGCTCACCT TGAATCATAA CAAAGAAACA AAGTCGTTGT AATGAGTGTT 
    GGCACAAAGT AGCATCATTG ATTGTTTGTG TTGTTAGTAG TGATGGCACA 
    AAGTAGCATT AAGGATTGTT TGCCTCAGTG AAAGATAGAG AGATAAGAAA 
    GCTCACCTCT TGAGTTAGTG ACACTAAGTT GATTGTTGAG GTAGGAGATT 
    CTTGCAGGTC TTTGATCTGG TCTATGCGAT GATTTGAGCT ACCAAAACTA 
    TCACAAGTGC TCGAGNTTGA ATANAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 428649 [Map]; Strand: w
      • AT1G02210.1 - [+] show detail - NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
        Distance: -838; Region: promoter
    Flanking Genome Sequence: 12-3548-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GGTAACCAAA TGCTCAAATT TTATTTGACG TACCCTATCA AGTATCAATC 
    AACCTCGAAG TACTATTCTA GTCCTACCTA ACCCCATAAA CAAATTCCAT 
    TCAACGAAAG AAAACAAGAA TAAATTTCAA ATTAAGATGC NTTCATTTCA 
    GTAATGTCAA GAGTCTTTTT TTGGACTTTC AAGTCTACAT CATATATGTA 
    CACGTGCATG TTGTCATGTT GATGGCTAAA TCCAAAACCC ATTAGACTAT 
    TGTTTATTTG TTTACATTAT CCTATATCAT GTAATTTTAG TAATCTTTCT 
    TTTTCTTCTA CATCACTTTC ATTCTGTTTC TTGTTAATTC CTCTGTTTCG 
    GCGTTCAAAG ACTTTGCTTT CGTTTATTAT ACATCAAATT ACGTACCTTA 
    TTCGTTATAT CTTCTTCAGA ATTAAGGAAT TTTTTTATGT TGCCCAAAAA 
    AAAANAATTT TGTTTTTCTA AATTACCTAC ATATAAAAAT TGTAAACCCT 
    ATTTTGCATT TTTCATCGCT CTCTATNGTT TTTAACTTTA TGGGTTTATT 
    CGATAAGAAT GAAATATCCG GCGGATTTCA AATTCCGGCC GACAGATGAC 
    GTTATCATCG AATATTACCT CCTGCTAAAA CATCTGGGNN TCAAGGAAGG 
    CAATATCATC ATTTCATTAC CACCGTTAAA ATCTCTAGTT ACCNATCCTT 
    GGCATGTGCC ATGAAAGTTT TGGGCAATTA ANGCTANATC ATGATTTTC

AT1G02210.1

Model type
Protein coding
Short Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Computational Description
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 4 (TAIR:AT1G02230.1); Has 519 Blast hits to 519 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 519; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR