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Mutant Lines
12-3570-1

12-3570-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 23080168 [Map]; Strand: c
  - AT1G62370.1 - [+] show detail - RING/U-box superfamily protein
    Distance: 6979; Region: intergenic
  - AT1G62380.1 - [+] show detail - ACC oxidase 2
    Distance: -2002; Region: intergenic
Flanking Genome Sequence: 12-3570-1 - 5-prime edge
```
GATGCTAGAT AGATGATTTG CATTGCCGCA TCATTCTTGA TTTATTTTCC 
TGAAAAAATG TTTTAACAAA ACTATTGCTT CACTACAATA AAACTAAAAG 
TAAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 23080244 [Map]; Strand: c
- AT1G62370.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 7055; Region: intergenic
- AT1G62380.1 - [+] show detail - ACC oxidase 2
  Distance: -1926; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTAGCATCAA 
CACCTTTTTG ACTTTTGGAT TCATTTCTAA ATTAACTAGT ATAATTTATA 
ATTTAGGATG ATTTGTTTTA TATTGAATTA AAATGGATAC AGAATCTATG 
ATCGAGTAGA TTACAAAAAA TGATTAAAAA AAGAAGAAGA ATTAAGTTGA 
ACAAAAAAAA TTGAACCAAA CTCGCATGAA ATAGTGAATA TACAGGGTAT 
GATGGGAACC AAATATATAT TTAAATTTTA AACTTACATC TATCTTAATT 
TTTGCTTCCC ATGTTATCTT TTGGTACTCA TATCATAGTT CATAGATTAT 
GTGCGTACAC ACTACACATA TGATTATGAT TTATGAATAC TGCATTAAAC 
TGTTTCAAAT GCACACTTTA ATTTCTCTTT TTCTCCAACC AAACTTTAAT 
CTAGATCTAA ACATTATATA TTAATAATCA TGTGTACCCA TTANACAATT 
ATTGGAAAAT AAAAAATTAT ATCACGCNCA TGAATGGAGT CTAAGATCGC 
CCAAGAGAAA AGTAGGTAGC AGCCACGACC GAAGTCTTTG TTCTCACTTT 
GGTTAACGTT TTTAANACGA TAGGGAGAGT GAGAAAGAGA CATTGTGTTA 
TTCAACAGTT TATTATGTAA TATAAGCT

AT1G62370.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03965.1); Has 610 Blast hits to 610 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 219; Fungi - 27; Plants - 270; Viruses - 11; Other Eukaryotes - 83 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G62380.1

Model type: Protein coding
Short Description: ACC oxidase 2
Curator Summary: Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.
Computational Description: ACC oxidase 2 (ACO2); FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate oxidase activity, copper ion binding; INVOLVED IN: response to salt stress, detection of ethylene stimulus, ethylene biosynthetic process; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G12010.1); Has 8564 Blast hits to 8520 proteins in 992 species: Archae - 0; Bacteria - 1100; Metazoa - 104; Fungi - 1037; Plants - 4951; Viruses - 0; Other Eukaryotes - 1372 (source: NCBI BLink).
Link: InterPro Scan - TAIR