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12-3617-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23352946 [Map]; Strand: c
      • AT3G63200.1 - [+] show detail - PATATIN-like protein 9
        Distance: 5382; Region: intergenic
      • AT3G63210.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: 669; Region: intergenic
    Flanking Genome Sequence: 12-3617-1 - 5-prime edge 
    CTATATACTA GATATAGCCA TATAGGAGAT ACCAAAATTA ATCTGGTAAT 
    GTGTTCAGAC TCTGAGTCTA ATGTCAGCTT TCTGCATACT CTATAATAAT 
    CATGCATGAT AGTATTTGTT GTGAATCAAG TGATTTATGA AGAATGAACA 
    ATTGAAGATA CACATATGAA GAAACAAAGC TGTCAGTCAT AAAGTAAAAT 
    AAATAAAATG TACNTGTCCC TTTGGGTTTC CCGTGACACA CATAGTAGAA 
    ATTTATAAGG AATCATTTGT AATAATGAAT CTTTTGTTTT GGTAAATCAT 
    TTGTTGTAAG AAAAATGTTA CAAAAAAAAA NNAANAGGAA NANATCTTTC 
    ANTAAAAAAG TNGGGCCAAA NGGGGGGGGA GGTTTCCNCC AAAGGTTCTC 
    GNCCGNNTTA TGTNCATNGN CGNCNNTNTG CNANAAAAAA CTNTTTTTNT 
    GTANCAAACA GGGTANCNCN CAAGTNGCCT TCNTTNGTAA ANAAAAATAA 
    AAANGGNTTT GAAAAAAACA NACAAAAAAA TNTTACCAAA ATCCATTACN 
    TTGGCCCCTG ACTTNACTTT TNTATTACAA ATTCNACTTC CTTTNTTTTA 
    TTTTATTTAA ACNCCTTTTT AGGCAANCAA AATTAAAAAA GCAAANCTTN 
    TGACANGTNC AAAAACCCCC CCGTGGGCGG GCAGGTCTNT TTTACACATG 
    ACGGGGCCNA NNTTNCCTTC CTNTTNTTTT TTTTGNCAAC CACTTGNT

AT3G63200.1

Model type
Protein coding
Short Description
PATATIN-like protein 9
Computational Description
PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63210.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF581)
Curator Summary
encodes a novel zinc-finger protein with a proline-rich N-terminus, identical to senescence-associated protein SAG102
Computational Description
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT3G22550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR