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12-3640-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11582575 [Map]; Strand: c
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 2028; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 3941; Region: intergenic
    Flanking Genome Sequence: 12-3640-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CTCATGTGTA AAGGACTCTC CAACAACTGA AATCCGATCC ATGACATCGT 
    TAGTATTTAC CTGGGAAATC AAGATGTGAT AGAGAAATAT CTTGTGCTTT 
    AATTAGTTCC TGCAAGTTAT AAATCACTTA AACACATCAG ACATATCCAT 
    AAAAAGATTT TATCAATGTA TGTTTAAATT TGACCATTTT CCGCTCAAGT 
    ATCATGTATC TTAGTACAAA ACTATTATGT TAACAGTCTA CTAGATAGCA 
    AGAACATAAA AAATACAAAC TCAGAAATGA GAAGATGTTT ACCTACCTGA 
    CCCTTTTTCC GAGTAGACTG AATCAATTTC TTATGTTTAG TTATTTTCAA 
    CTTCAGAATC TTCTATCTTG TATTGATTAA AAAAAATACA TTCTATAAGC 
    AATACACTAA ATACAAAAGA CTATATAATA AAACCACAAA AATAATGCTG 
    ATGTANAGAA AATCTTACTA AGTATGATCC AAGTCACCTT AGGACTGAGG 
    AAATATTTGG TTGTCTCATT GGCAAAGGAT TCTCCAACAA CGAAAACTCA 
    TCCCTGATAT TGTTAATATT GTACCTTGCG AATCAAGATA TATGATATTT 
    AATTAGTTCT TACAAGTTAT AGATCACTTG AACACGTCAG ACGTTTCCAG 
    AAAAAGTGTG TTTATCTACC TGACCCTTCT TCTTTCGGGG AGACTGAATG 
    GCTTTCTTAA ATTANGTTCT TTTCCGCTTA ANATCCGTCT ACCTTGTTAT 
    AAAACCATTC TATTAGCN

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR