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12-3643-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22672272 [Map]; Strand: w
      • AT1G61440.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G61450.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -987; Region: promoter
    Flanking Genome Sequence: 12-3643-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTC TCTGCATAGC TAAAACTTAT AAATAAGAGC 
    AACACGATCC TCTTCTTCCC CATGTGTATT TTTTTTTCTC TAATAACTAA 
    GAAACGAACA TATAGACAAG ACAAAGAAAG CCAAGNGAAN AAACACTCAG 
    GGATTTTTTT TCTTCNAGGG ACTTGTCAAA ACTATTTTCA AGCNCCTACT 
    ATAAACAATG TTGACCANAC CGCACTAATG TTCCAAAATA CTCATTTTTC 
    AANGGAAACG TAAATGCCAC AAACAAAGTC CAATTTTTTA CCCAGTCAAT 
    TACGCAACAT AGTCATATTT CATGACGNGA ACAAGTGAAA NATGTGCAAA 
    TTTACTCTCC ACCAATCTAA ANATAAAAAA TTTTTCNATG CANAACGCAT 
    NGCTNGACCA TAATCTTGCC AGCTNTTTAA ATCCANAACG NGCCAATGAT 
    ATACATCAAA ACTCTNGGTA TATGAATAAA TCANATGACA TNGGTTTCTG 
    AAATCATNGT TTTTACCCGT ACAATACACG GTTTAAANGT TAGNGGATTC 
    ACCGGAAGAG CTTTCTTGAA GGGGGAGACT ACGTGAAATC TCGTTCAGGC 
    ATTTCACCGA ACACTNGTAA NGCATTATCA NAACGCTCAA AGCTCCCATA 
    ATGTCGTTNG ACACTAATGC CCCGATTACA CANTTGAAAG TACATATAGC 
    CCATTCCCAA CGGGAAACTG TTTTTGTCCA AAAAAGCTNA CTTTNAACAG 
    TCAANATTG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22672277 [Map]; Strand: w
      • AT1G61440.1 - [+] show detail - S-locus lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G61450.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -982; Region: promoter
    Flanking Genome Sequence: 12-3643-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CTATGCAGAG ATAACAAAAG AGAGTCCTTT GTCTATAGGA CAAACTCTCA 
    GCTCCTCTAA TGGAGTGTAT GAACTGGGGT TCTTCAGTTT TAATAACTCC 
    CAAAATCAGT ATGTTGGAAT CTGGTTCAAG GGAATCATTC CCCGGGTGGT 
    TGTTTGGGTG GCCAATAGAG AAAAGCCTGT TACAGACTCT GCAGCAAATT 
    TAGTTATCAG CAGCAGTGGA AGTCTTCTGT TAATTAATGG CAAACATGAC 
    GTCGTGTGGT CCACTGGAGA AATTTCTGCA TCTAAGGGAT CTCATGCAGA 
    GCTTTCCGAC TATGGAAATC TAATGGTCAA AGACAACGTT ACAGGAAGAA 
    CTCTATGGGA AAGCT

AT1G61440.1

Model type
Protein coding
Short Description
S-locus lectin protein kinase family protein
Computational Description
S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, ATP binding site (InterPro:IPR017441), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61400.1); Has 123186 Blast hits to 121269 proteins in 4842 species: Archae - 106; Bacteria - 13498; Metazoa - 45919; Fungi - 10210; Plants - 35088; Viruses - 427; Other Eukaryotes - 17938 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61450.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61415.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR