Home
Mutant Lines
12-3678-1

12-3678-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 123200 [Map]; Strand: c
- AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
  Distance: -76; Region: promoter
- AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
  Distance: -76; Region: promoter

CCCCAAAGTT TCCGTAATTT CAATTTATCC CCAACAGTTT CCGTAATAAC 
AATTCATGCC CAAACGTTTC CATAATTACA ATTTATGCCC AATAGTTTCC 
GTAATTACAA TTTATGCCCA AAATAATTTT ATATTGCACT AAAACCCAAG 
TTGTTTGATT TACTAGTATG TAGCCTCGGA GTCGTCGCCG TTAGTCCGTG 
AGGAGAAAAT AGGCCCACTC TGGCACACTC TCTCTGGGTT TAGGTTTAGG 
TTTTTTTGGG GCTCTCTATC CTAAGAAACT AGGAGACATC ACACTTCACC 
AAGTCTACTT ATCGACAATT TTATCGTATC ACCATAACGA CAATAAGGGC 
CGGACTAATG TTTGTACACA TGTCCTCTCC TTTTACCCTT TTAAGGCTTT 
AGCTAAATCT AAACCACATT TATAATCGTT TATTATATGA ATCTTCTTCT 
TGCGAAAAAA CATGTCAAGC TACTATTCTA AGTAAAATAA GAAAGATGAG 
CTGTGATTTA TATGGTAAAG TAAGATATAA AAGAGGTAGT ACTAGTACTG 
TAAAAGCAGA CTCGAGGAAT AAAGAAAGCA GGAAGAGCGT GGTGGTATCT 
TGTGGCACCT TTCTTCTCTA GTAAACTCCA CTGTTATGTT TGCTCTCTCC 
CAATCGTCAA CTAGTTTGTT CAATGCTCAT TTGAAACTAC ACTCGTTACT 
ACTTGGTACT ACACTTGCTA CACTCTATTA

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 123287 [Map]; Strand: c
  - AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 12-3678-1 - 3-prime edge
```
CTTTGGGGGG CTTAATTTGG CTTTTTGCCG GCACGGCAAT GGGAGGAGAC 
GAAACCGAGA GAAACAATGG GAGACGCTGC GATCCGTACC GTCGTCGAAG 
CCATTCACTC ATCTCCGACG CAGGCCGTCG TCTATCTTTG CGGCAGGTGC 
CTCTCTGGTT TCACTCTCTC TCTTTATGAT TGATTCGTAT ATACACAAGT 
ATGTGATTGC TCTGTGCTTT TGAGTGATCG AAATTGAATT
```

AT2G01220.1

Model type: Protein coding
Short Description: Nucleotidylyl transferase superfamily protein
Computational Description: Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01220.2

Model type: Protein coding
Short Description: Nucleotidylyl transferase superfamily protein
Computational Description: Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link: InterPro Scan - TAIR