1. Home
  2. Mutant Lines
  3. 12-3701-1

12-3701-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19336507 [Map]; Strand: c
      • AT2G47070.1 - [+] show detail - squamosa promoter binding protein-like 1
        Distance: -188; Region: promoter
    Flanking Genome Sequence: 12-3701-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGT GAAGCAGTGT ACTTGTTAAC TTACCCCACA 
    TTTCCCCACT CATGGTAGTC AATAATCACC TGTTTCGCGG AACATTCCAA 
    GAGTTTTTAT TGTCTATGTT GTGATGTACC ATACATAGTA AGTGTTGGTT 
    GCNGACCTTC TTGGGAAGAA ATCGAGTGTT CCGTGCCTAG TGAACAACCG 
    CAGTAACCGC TAGTTGACAA AGAAAGTGTC GGTGTTTGTA AACGCGCTTT 
    GACTTTGACT CCTAAAGATA TAACAAGTTT TCTAATTGGG TCAACCTTTC 
    GGTCTCCATG TGGTCATTAT GGTCTGGGCT TTCTTGGCCC ACTCTTTTTA 
    TTTGGCCCAC TTACATAAAC CCGCTTTTAA TATTTTTTAT ATAAAATAGT 
    ATATTAGATT TGGTTTCTTG TTAATTTCGT TTTGTTTCTT GTTTTTATCC 
    TTTGATGGCC TCTAATCATT TAATTTAACG TGGGATATTA ACATTTTGTT 
    TTGTTAGTGT GAGTACAAAG AAAGAGAGAC CAGTCACATG ATATGATGAT 
    AAACTCGAAC GAAGAATCCA ATGCGCCACG TCTTCCATGT TCCTCGTCTT 
    GGTAGCTTTA GAATCTCAAT GGATCTAATT CCTTTCAATT ATATAATCTC 
    ATTATCGTCC TTAAAAGTAT ATATTATTCC ACATTTTAAA AACCATGCNT 
    GATGCTGATT ATTATTGGNG GTATGNATTG ATATACCTTC CGTTCAACTC 
    AGCCCCAATA TGTNTACT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19336513 [Map]; Strand: c
      • AT2G47070.1 - [+] show detail - squamosa promoter binding protein-like 1
        Distance: -182; Region: promoter
    Flanking Genome Sequence: 12-3701-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATGGGAAAAA GAAAAATGAG ATACACATAA TTCACAAAAT ATAATTTTTA 
    TCTTAGACAA TTTTTTAAAA ATAATATTAA AATCAGTGTA GAAGTGGTCC 
    CCACCACTAT TTTGTTTTTC CTTAAAATTA ATTATTATTT TTGCCTGGAC 
    CTAAATAAAA TTGGTTTTTT TTTTTTNNNN NNNNGCCCAA CCNTTTTTTT 
    TTTNNNNGTT TGGNNTCTNN NTNTNTNNNN CCCCCTTTTN GNCNCCCCCC 
    NNCCCTTTTN GGNCCNNCCN NACCCTTCCC CANNCNTCCT TTTTTTTNNC 
    CCCCCCNANC CCCAANTNCN CCNCNTTTTT TTTTNGNNAA AANCNNCCCC 
    NNCNNTTNGG GNCNNNNTNA ANGGGGGTTT TNGGGGGGNC CCTNNNCCCN 
    NTTTNGNTTG NANANGGGGA AAAAGGGGNT NTTNNNGGNN TNAAAAACCN 
    CCNTTGGGGG NTTTTTTTAA ANGGGNNCCC ANGGGTTTTT TNGGNANNAN 
    GGNCCNNGGG GGGGGGCTNA ANGGGAANNC CNCCNGGGNC NGGANCCCCC 
    CCGGCCCCNT

AT2G47070.1

Model type
Protein coding
Short Description
squamosa promoter binding protein-like 1
Curator Summary
member of SPL gene family, encodes DNA binding proteins and putative transcription factors. All have the SBP-box, which encodes the SBP-domain, required for and sufficient for interaction with DNA.
Computational Description
squamosa promoter binding protein-like 1 (SPL1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333), Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1); Has 940 Blast hits to 885 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR