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12-3719-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9732492 [Map]; Strand: w
      • AT1G27930.1 - [+] show detail - Protein of unknown function (DUF579)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-3719-1 - 3-prime edge 
    TCTCCAAGAA AAAATATCCC AAATCTTTCT TCCCTATTCA GTCCCCCAAT 
    CAACAATCCT CTTCACATTT CTATTTTCTC CTCCGAGGTC GTCTCTCGAC 
    CAAACCACAA AAACCAGAAC AAAAATAACT AAAAAACAAT CAGATCTGAG 
    ATCGAACAAA ACAACATGAA CACGTTAATC CCATCGGAGA AAAGATGGAT 
    CATCACCGGC GTTTTACTAG CCGGTTTAGT TGGCGGTGCT TTGCTTTTCA 
    CAAGCT

AT1G27930.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF579)
Curator Summary
Function unknown. Interacts with eIF3.
Computational Description
FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF579 (InterPro:IPR021148), Conserved hypothetical protein CHP01627 (InterPro:IPR006514); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF579) (TAIR:AT1G67330.1); Has 251 Blast hits to 250 proteins in 20 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 239; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR