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12-3747-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8355140 [Map]; Strand: c
      • AT4G14550.1 - [+] show detail - indole-3-acetic acid inducible 14
        Distance: -5121; Region: intergenic
      • AT4G14560.1 - [+] show detail - indole-3-acetic acid inducible
        Distance: -5918; Region: intergenic
    Flanking Genome Sequence: 12-3747-1 - 5-prime edge 
    CNTCANACTA AATCCTATAA CTACTTACAA ATGGAGGCTT ANNGAAAAAA 
    AGGTCTATAT GATTTTTTTT CTTCTCGGAT GACTTCTTTA TTTATGTTTT 
    TTTCTTCACG GTCACAAAAA GATATATGAA ACTTTATCTT TCTTTTTTTT 
    GGTCAAACAT ATGAAACTTT ATCTTAANAA TTTATATAAT ACNTTGAAAC 
    ATTTTTAAGC ATAGGAANAT GCCTATCTAT GGTCANCTCC TACCATGGNC 
    CTAGTACCAT GTCTCTGGTT CCACCAACAT TATGTNTCGT ACTATCANNG 
    CCANATTCTC TTATTTATGT CTAGGGTTTG NGATCTATGC ATGTATGTAG 
    GACCTTGTTT ATAAGGTCGA TCTGCATTAT AATCCTTTAT ACTCCAACTT 
    TTNCANCTTA TCATCNAGTA ATATAAATCA AACCACTGGG ATTTTAAAAA 
    TAAAATTATG NCTTTNNAAG GAATCATNGN ATCNTNTAAA TNTNTNNTNT 
    NAATTTTAAN ATAAAAACCA TNNAACTTTC ATGTAATNAC ATAATGGCGA 
    AGNCCNTTAT NCNNACATTG NAATANCGCA CAGAAACTNN AAAATGGNGN 
    CCCNNANNTC NGGGACTTTG NCTCAANCTT NCAAAANCAC NGNCNNNNTG 
    GGTGNNTTTT NTNTNNNNNG TANNTNGNNC CGGNAGGNNN CAGTGNTGNN 
    TNTTTNNGNG NANNACCGAN GNCGCNGTCT GCNTTGANNN NACNTCANNA 
    NNGGGNNAGG TNNTTT

AT4G14550.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 14
Curator Summary
IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19.
Computational Description
indole-3-acetic acid inducible 14 (IAA14); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 7 (TAIR:AT3G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G14560.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible
Curator Summary
auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.
Computational Description
indole-3-acetic acid inducible (IAA1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 2 (TAIR:AT3G23030.1); Has 1898 Blast hits to 1895 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1895; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR