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Mutant Lines
12-3760-1

12-3760-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 22448067 [Map]; Strand: w
- AT1G60960.1 - [+] show detail - iron regulated transporter 3
  Distance: -853; Region: promoter
- AT1G60970.1 - [+] show detail - SNARE-like superfamily protein
  Distance: 0; Region: exon6 (CDS)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA CTCTGAAGGA AAAAAAAANC NCCGCAAAAA 
AANGTNTNAN GTNCATTAGG GANGGGGTNN CCTTGAAAGT NCGGATCAAN 
GTANCTNTTT NAAAGTTNGT NTCAANANGA NGTANTTNTN AAAAAAAATN 
TNATCNCANT TTCAAANCCN CCNGTCCCTG CTCGGATANA GGANCGTTAG 
GGNCAGGGCT NTNGATCCCN GCTTTNCCNG CTNTTNCNTT NGCNTCCGTN 
TCCAAAACAA TNCNGAAATN TAAAANNTTT TNTTNGACTN TGTANCCTNT 
NAAACAGCCC NTTTNTNATC NAAGGGTTTN AGNAANGNCA AAAAAAAAAT 
TTTTTTTTNT NCCCCCCNTC NNTANTTTNT TNAAAGTTNC NAACCNGGGC 
NGGGNACNNC CCGGNCCCTN TNGGGGGNNN NTTTACNCCG NNNACNNCCC 
GGNCCC

AT1G60960.1

Model type: Protein coding
Short Description: iron regulated transporter 3
Curator Summary: Encodes a plasma membrane localized zinc/iron transporter.
Computational Description: iron regulated transporter 3 (IRT3); FUNCTIONS IN: cation transmembrane transporter activity, zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: cation transport, zinc ion transport, response to nematode, iron ion transport, metal ion transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 4 precursor (TAIR:AT1G10970.1); Has 3842 Blast hits to 3068 proteins in 499 species: Archae - 2; Bacteria - 683; Metazoa - 1421; Fungi - 659; Plants - 616; Viruses - 7; Other Eukaryotes - 454 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G60970.1

Model type: Protein coding
Short Description: SNARE-like superfamily protein
Computational Description: SNARE-like superfamily protein; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: clathrin vesicle coat; EXPRESSED IN: leaf whorl, sperm cell, pedicel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT3G09800.1); Has 621 Blast hits to 621 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 227; Fungi - 139; Plants - 149; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
Link: InterPro Scan - TAIR