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12-3762-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 122922 [Map]; Strand: c
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -354; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -354; Region: promoter
    Flanking Genome Sequence: 12-3762-1 - 5-prime edge
    CTAGGAGACA TCACACTTCA CCAAGTCTAC TTATCGACAA TTTTATCGTA 
    TCACCATAAC GACAATAAGG GCCGGACTAA TGTTTGTACA CATGTCCTCT
    CCTTTTACCC TTTTAAGGCT TTAGCTAAAT CTAAACCACA TTTATAATCG
    TTTATTATAT GAATCTTCTT CTTGCGAAAA AACATGTCAA GCTACTATTC
    TAAGTAAAAT AAGAAAGATG AGCNTGTGAT TTATATGGTA AAGTAAGATA
    TAAAAGAGGT AGTACTAGTA CTGTAAAAGC AGACTCGAGG AATAAAGAAA
    GCAGGAAGAG CGTGGTGGTA TCTTGTGGCA CCTTTCTTCT CTAGTAAACT
    CCACTGTTAT GTTTGCTCTC TCCCAATCGT CAACTAGTTT GTTCAATGCT
    CATTTGAAAC TACACTCGTT ACTACTTGTT ACTACACTTG CTACACTCTA
    TTAATATGCA TCACTTGGTA TTTTATGGAG TTTCGTGCTA GAGCAACATC
    ATCTAAGAAA TAAAAAATGA ATGATACTAC TGTAGTAGTA ATATATTGAC
    AAGATAGATT AATAGAAAAG GACAAACACT GTAAATGTTA CCTACATTGA
    CACTTGACAG ATCAATCAAA GGACCCCAAT ATATTACTTT TCGGAATAAA
    ACAACAATCA TGACAAAAGG TATTAAAAGA TGTAACTATT TGAATAAAGA
    TATCTGCATT TGTAACATTT TGTATATAGG A
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 122963 [Map]; Strand: c
      • AT2G01220.1 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -313; Region: promoter
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: -313; Region: promoter
    Flanking Genome Sequence: 12-3762-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAACTC 
    CTAGTTTCTT AGGATAGAGA GCCCCAAAAA AACCTAAACC TAAACCCAGA
    GAGAGTGTGC CAGAGTGGGC CTATTTTCTC CTCACGGACT AACGGCGACG
    ACTCCGAGGC TACATACTAG TAAATCAAAC AACTTGGGTT TTAGTGCAAT
    ATAAAATTAT TTTGGGCATA AATTGTAATT ACGGAAACTA TTGGGCATAA
    ATTGTAATTA TGGAAACGTT TGGGCATGAA TTGTTATTAC GGAAACTGTT
    GGGGATAAAT TGAAATTACG GAAACTTTGG GGGGCTTAAT TTGGCTTTTT
    GCCGGCACGG CAATGGGAGG AGACGAAACC GAGAGAAACA ATGGGAGACG
    CTGCGATCCG TACCGTCGTC GAAGCCATTC ACTCATCTCC GACGCAGGCC
    GTCGTCTATC TTTGCGGCGG TGCCTCTCTG GTTTCACTCT CTCTCTTTAT
    GATTGATTCG TATATACACA AGTATGTGAT TGCTCTGTGC TTTTGAGTGA
    TCGAAATTGA ATT

AT2G01220.1

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.2); Has 432 Blast hits to 425 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 78; Viruses - 0; Other Eukaryotes - 311 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR