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12-3780-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18910478 [Map]; Strand: w
      • AT3G50870.1 - [+] show detail - GATA type zinc finger transcription factor family protein
        Distance: -512; Region: promoter
    Flanking Genome Sequence: 12-3780-1 - 5-prime edge 
    AGATTGACAT TCGCATTTTA AAGTTTTGTG TCCAACAACT AGCAAACCCT 
    TCGCTTTTTA AACCAAGATC AGTTTTACTA CATAGTTTCG ACTTTTTGTT 
    ATTTTACTTC CCATCATATT TTGTTTTATT TACTACNTGA CATTTTCATA 
    ATGTACGGTA CATTTTCATA TATTAGCATC CTTATCTAAA AGCTAATCAA 
    CTCCATAACG TACTTGAAAT AGGGATATTT TAGTTGAGTT AATTATTCAA 
    AACAATCACT GTGTGACACA GACTCTATGT AGACCAAGCA TGTGTTATGT 
    AATTAGAAAA AATAAACTGT GATTAAAATA TCTTTTAACT TGTTAACTTG 
    GCTGCCTAAA GAAACTTGAT ACTGTATCAT CGTTCATCGT ATTTTGTAAT 
    TAATAAAACA TAAAAAAGCA AGGAAAACAC CTGGATCACC TAACTTCTTA 
    GGAATCATCG TCCTTTGTAA TATGGCACTG CATTCATGAC TCAACACTAC 
    CATTCCTTGA ACTTCTTGAA TT

AT3G50870.1

Model type
Protein coding
Short Description
GATA type zinc finger transcription factor family protein
Curator Summary
Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.
Computational Description
MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
Link
InterPro Scan - TAIR