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12-3902-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26871476 [Map]; Strand: w
      • AT5G67350.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -1990; Region: intergenic
      • AT5G67360.1 - [+] show detail - Subtilase family protein
        Distance: 415; Region: intergenic
    Flanking Genome Sequence: 12-3902-1 - 5-prime edge 
    CATGGAAGGC ATGATACAAA TTAGACTTGT GGAGTGTGTG TAATCACTAT 
    CATCTCTGAC AATCGTTAAC TTAGACATTA AATAAATCCA CCATTTAGTT 
    TAAGAAAAAT ACATTTATTG AAGTCTGAAA ACATATATTA TACAATTCGA 
    TTTTCTTGAA GTGGAGAGAA ATTTACAGGA AAAATAGTTC CACAAGTGCT 
    TGGGAAAATA TTGGAAACTG ATAATAAGGC CAAATGAGCC CATTATATTA 
    TACGGTCCTT GTAAAGCCCA TAAATTGACC GAAATCTATC ATGCTTTTCT 
    ATTAGTTTTT TTTTNGNGNG ACAAAAAAAA GTTTTNTCAC CANCAAATCT 
    AATCATNGAT AATCTCNGGA TGCCTATGGT AAAGTTTCAT AATTCAAAAN 
    CTNTACTTNG GTTNTTNACG GTNTNTNCNC TTTTNTAGCT NAGTNGATAA 
    AAACATNTTA ATNCTATCTN AAGTNTATGG GGGGGTAATN AATCGTNGAC 
    TTTTTGTATT AACTTTTNAT TTTTTCAAAC ATTTTNTCTT CATTAACTAT 
    TTCAAGTCAC ATGATAAAAC NCCTANAGAN ACCCANCTAC TGTTGTANCC 
    GGANAATATA TTTCTTTTTA AAATTAAAAA CAGCAAGACN TCCCAAAAAC 
    AAACTAGGCA AGTCTTAACA NACTGCNTGT CGTTTTTGCT AACAAAGGTT 
    T

AT5G67350.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67360.1

Model type
Protein coding
Short Description
Subtilase family protein
Curator Summary
Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.
Computational Description
ARA12; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, seed coat development, mucilage metabolic process involved seed coat development, mucilage extrusion from seed coat; LOCATED IN: extracellular region, apoplast, cell wall, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT2G05920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR