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12-3923-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16769951 [Map]; Strand: w
      • AT4G35240.2 - [+] show detail - Protein of unknown function (DUF630 and DUF632)
        Distance: -2864; Region: intergenic
      • AT4G35250.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 1220; Region: intergenic
    Flanking Genome Sequence: 12-3923-1 - 5-prime edge
    GAAAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCTCTG ATCTGATTGT GAAGAGCATT AATTCATTGG
    ATTTTATCTT CTTTCTCTGC CACTAAAGTT TTGTAGTTGG ATGGAGATCA
    CTTTGGTCAT CATGCCACTT ATATATTTCC ATGTGTCTAT GTTTATTTTT
    TTTTATTCAT TTACTCCTCT ATTATTGANA TTATTTTTCC TCCTACNATC
    GACTTTCAAG TTGAGAAACA AATCAAAATG ATCTGAAAAG TTTTAAACAG
    AACAAACGTG TACCTTTGGC AATTTGGCAT TAGTGAAGTG AGATATATCA
    ATAATGCATA CCTAGTATTT TTTTTTAACT CTATATGGAC TTAGTTNATG
    TAGTCGGGGA CTTTTTTTTN GGTNTTAATN AAAAAANAAN GNGTAAAAAA
    ANGTANCTAA TTTTTATTCA NAAAACGGAT CNATNGTNTT NGGTNAACCA
    TCGGGGTCNC TGTNTAGGTN GGCCAAAACA NTTNGGGGAA AACNCAAAAN
    GNNAATGGGG TTNCAAGGTT CNANGTNATT NCTTCTTNCA TTACTTTAAA
    NNCTAGNNCT ACNNCANGGG AATAAAATCA NTGAAAATTT NTTCCGAAAA
    AACTTNGACN NGACACCCTA ANTGATAATC AACGACCTAN CCCTATGATT
    ANATNCCCAT TTTTTNCCCC NNTTTAAATN CCTTTNNAGG TTTGGNTTTT
    TAAACATGAN CGGNCCGNNC NNCC
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16769946 [Map]; Strand: w
      • AT4G35240.2 - [+] show detail - Protein of unknown function (DUF630 and DUF632)
        Distance: -2859; Region: intergenic
      • AT4G35250.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 1225; Region: intergenic
    Flanking Genome Sequence: 12-3923-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTGGCAGTCT TTATTTTTCT TTACTATATA TACTTTCTTG TTAATTGGTA
    TTTAGATATT GGGAGGGACA GTTGCTTTCT GTTGGATATT CTCTTTTCCT
    TTTGACATGG CTTTCGCATA AATATTTAAC CTTTTCCATA ATTATTGTGA
    TTTTATAAAC TGAATT

AT4G35240.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF630 and DUF632)
Computational Description
Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1).
Link
InterPro Scan - TAIR

AT4G35250.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G34460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR