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12-3990-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Branching::others)
  • abnormal (PATO:0000460)
    (Stems::others)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 463122 [Map]; Strand: c
      • AT4G01070.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT4G01070.2 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-3990-1 - 3-prime edge 
    AGAGAGATCG GTGAGATCAA CAGGAGGGAG AAAGACGGAG GAGATTGAAG 
    AAGGGAGCGA GTCGAGGACG GTTCTCTGAG CTTTTGATGG TGGACCTTCG 
    CCGGCGATGA CGAAGGTAAC GGTGAGGCCG TGAAGATGGA CGAGTCGTTT 
    AGCGAACTCG ACGAGTGGTA TGAGATGACC CATTCCCGGA CTTGGTATGA 
    TCGCAACGTG AGGTGTTTTG GATTCCTCCA TTGATGCAAA TATTCAAGAA 
    CTGCTCTTTT TTCTTCTTTC TACTTTTGTA GTTTGTGATT ATTATCTCCT 
    TTTTTCTTTC TTTTTTTGTA ATTTGTGTGG TGTTTTTTTT GGTTGCCAAT 
    TAATGCAGAA TGAGCTTTCG CGGATGCAGT NACCAGACAC CNTTAGATGG 
    CTGGATNCAA GCAGCGATGC CAATCCTCCT TTCCTTCTNT ACGCTTGTTC 
    CTNTCTNGTG CNNAGCCTCA TTTCTGTTCC GCCAACCGCC CTTCANACTT 
    NTTCAACCCC TCTGGATCTA CTTGCTGCTG NTGGAACCAA NNCAAAGAAC 
    CTCCCCTGCC NTTTTCAAAN ANTNGAACTG CANCNCCCCC AANGGAAANC 
    TTAANCCCGN NANATNTTTN GCCCNCNTNA NAGCNCNNNA NTTCNANACA 
    NTCCNGATNT TGNTTAANNC CTNGNANNCT NCTNTTAANA TGGGGCCAAN 
    TTTTGNTTTT NTCAGCNATC ATCCNCTTTC AATNNNG

AT4G01070.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Curator Summary
the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta
Computational Description
GT72B1; FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: xenobiotic metabolic process, response to cyclopentenone, response to salt stress, response to toxin, xenobiotic catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7551 Blast hits to 7483 proteins in 336 species: Archae - 0; Bacteria - 81; Metazoa - 2271; Fungi - 41; Plants - 5061; Viruses - 34; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01070.2

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Curator Summary
the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta
Computational Description
GT72B1; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1).
Link
InterPro Scan - TAIR