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12-4009-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25122696 [Map]; Strand: w
      • AT1G67150.1 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: 0; Region: exon1 (CDS)
      • AT1G67150.3 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: 0; Region: exon1 (CDS)
      • AT1G67150.2 - [+] show detail - Plant protein of unknown function (DUF247)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4009-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    AGGTCTATAA GTAAGAGGGC CGATGAGAAG CATCCGAGGT CTATAAGCTT 
    CTGGATTCAC TTCACGCAAC TGGCTTGGCA CTCTGTATAT ACAAGGGTCT 
    TGAGATCCCA TCTCCAATTG CTTATGAGCN TTTATATTTT CAACATCAAT 
    AATAGTTTTA AAAAAATCAA AGAGATACCG AAGAAAAAAA AGAAAATGTT 
    GTAAAAGTTT GTTCTACGTC GTCTTTATGC TTATGAGATT TAAGACACAA 
    AATTAAGGAA ACACAAGCTT ACTGTGATAC GGATGTAAAT GAGCTATGGA 
    AGTAGGAGTT AAGTCTTTTT TTTAAAAAAA TTGCAAATTG GAGAAGGGTG 
    TGGATCTGAC AACAAAGAGA GAATTTGGGA TTAGAAAATG GCAATTTGGG 
    ATTAGAAAAA TAAAGATACA CAGGAGAGTG CATAANAAAA CATAAGGGTG 
    CGTTGTCAAT CGTTTCACTA AATTAATTTT ATAAAACTTT AATAATTAAT 
    AGTAATCTCG TAAGTTTACT TCATGTCAAA CTATTTTAAA TAATTATGAT 
    TAATAAAATA ANCNGAAATA AATTTACTNT GATTCTCATC GAATAAANGA 
    AAATTCATTC AATCCTATNA AGNTATTTTN GTTTNNCCNA GTTTTTGTAA 
    NTTTTCTTTT TNNCCTNCAT TGGTNNAAAA AAATTNNATT NNGACCTANN 
    GNNNNNTNAN NNTTTNTGGG AGNA

AT1G67150.1

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT2G44930.1); Has 1000 Blast hits to 902 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1000; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G67150.2

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT2G44930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G67150.3

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF247)
Computational Description
Plant protein of unknown function (DUF247); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT1G65985.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR