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12-4132-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23219232 [Map]; Strand: c
      • AT1G62700.1 - [+] show detail - Arabidopsis NAC domain containing protein 26
        Distance: -1316; Region: intergenic
      • AT1G62710.1 - [+] show detail - beta vacuolar processing enzyme
        Distance: 4642; Region: intergenic
    Flanking Genome Sequence: 12-4132-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA ATAAAAGACA TAGACTATGA TTGAGAAGGA 
    CAGAGAGAGA GAGAGACAAA GTAGTATAGA TTATTAGGAC ACGGNTGTAC 
    ACTTTTTCAT GTGTCTTCTT CTCTCTTTTT CTTATTCTTA TTCATCATCA 
    TCACCGTCTG ATCTTCTTTA TTAACCCTAC TCTCTTTCTC TTCTCCCATC 
    CTCTCTCTCA ATATCTCTGA CTCTNGGGAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23219236 [Map]; Strand: c
      • AT1G62700.1 - [+] show detail - Arabidopsis NAC domain containing protein 26
        Distance: -1320; Region: intergenic
      • AT1G62710.1 - [+] show detail - beta vacuolar processing enzyme
        Distance: 4638; Region: intergenic
    Flanking Genome Sequence: 12-4132-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTTT 
    TAACCCCGAG TGAGATAGAG AGACTTAAAT TGTTGCAAAA GCT

AT1G62700.1

Model type
Protein coding
Short Description
Arabidopsis NAC domain containing protein 26
Curator Summary
Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.
Computational Description
Arabidopsis NAC domain containing protein 26 (ANAC026); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC 007 (TAIR:AT1G12260.1); Has 3282 Blast hits to 3264 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 6; Plants - 3017; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G62710.1

Model type
Protein coding
Short Description
beta vacuolar processing enzyme
Curator Summary
Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.
Computational Description
beta vacuolar processing enzyme (BETA-VPE); FUNCTIONS IN: cysteine-type endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress, vacuolar protein processing; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: gamma vacuolar processing enzyme (TAIR:AT4G32940.1); Has 785 Blast hits to 783 proteins in 241 species: Archae - 4; Bacteria - 10; Metazoa - 274; Fungi - 115; Plants - 253; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Link
InterPro Scan - TAIR