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12-4163-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28785034 [Map]; Strand: w
      • AT1G76700.1 - [+] show detail - DNAJ heat shock N-terminal domain-containing protein
        Distance: -1786; Region: intergenic
      • AT1G76705.1 - [+] show detail - calmodulin binding
        Distance: -1416; Region: intergenic
    Flanking Genome Sequence: 12-4163-1 - 3-prime edge
    GTTCTCTGCC CTGTTTCTGA ACGAAGAAGA TCGATGAGTT TTTTCTGTAA 
    CTTCTTCATC GTCAGCCGTC GCTCATCTGT CGCTTTCACT GTCCCTCTCT
    CCATAGTAAC GAATTACCTA AAAATCGTTC TCGATTAACT TGGAGACAGA
    AGATGGAAAT CAAATCACGA AAAAGGAGCC GACCCTTAAC CGTTCTCGAT
    TAACCGGAGA CAGAAGATGG AGATCAAATC ACGAAACAAG ATGCTTTCCT
    CCGATCAAAT CTTACGGATA GATATTGAGA TGAAGAATGA AGTTATTGAG
    ATCATCAGCT TATGTCAATA TCGGAAGGAT CATCGGCGAT TCTCTCTATA
    AGAACATAGA ACTTGAAAAA ATTAGGGTTT TTTCTGTTTG GAAGAAGAAA
    AAGGAGCGTG CATAAATTTT TGATTTCTTA ATGAAAGAAG AGATGACGGT
    TATCTTTCGA CTGATTTCCT TTTTTTGTTC TTTCTGACTA GGTTAACGTT
    GTTTCCTTTT ATTCAATTCT GATGTAAAAC AATTGAAACC GTTATTTAAA
    AAAGNTTTAA NNANCGGGGC TATTTTTNCC CGNANANNNT TTTNCCNAGN
    GGGGGNAANT TTTTTTTNNG GGGGGGNNNC CCCCCCNTTT TNNAAANNAN
    AANTTTTTNN NNANNNNNNA AA

AT1G76700.1

Model type
Protein coding
Short Description
DNAJ heat shock N-terminal domain-containing protein
Computational Description
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G21080.1); Has 22668 Blast hits to 22554 proteins in 3188 species: Archae - 168; Bacteria - 9129; Metazoa - 3918; Fungi - 2179; Plants - 2304; Viruses - 20; Other Eukaryotes - 4950 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G76705.1

Model type
Protein coding
Short Description
calmodulin binding
Computational Description
calmodulin binding; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 12 (TAIR:AT5G03960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR