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12-4175-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11340334 [Map]; Strand: w
      • AT1G31670.1 - [+] show detail - Copper amine oxidase family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 12-4175-1 - 5-prime edge 
    GACGACCGTG GGGAACTACG ACTATATAGT TGATTACGAG TTCGAACCTA 
    GTGGTTCCAT CAAAATTGGG GTAACATGTC TTTCAAAAAC TTTTCTAGCT 
    TATTTGTTTT TGGTAGGAGA AACNTTTTTC TAGCNTTATT ACATGCATTT 
    TACTTTATTG ATTTAAGAAC TTAATTGTTA ATCATTTCTA TTTTTGGTAT 
    ATTGGAATAT TCAGTTAATA TTTCAGAGAA ATACAATATT AAATTGTATT 
    ATACTAAACA TTAATTGAAA TTGAAAATGT AAATATGAGA CACAAACACA 
    GAAAGCATAT TGCTTGTGAT AAAAAGTTAA AAAAACAAAA AAAATCGATT 
    CATTTTTGTT TAATATATAG ACTCAGACTC AATCATACAA ACAAAATAAA 
    TAGATTCCAA CTCTACCAAA AACAAACAAT AAGATTTAAC AGGATCAATA 
    TTCCCAATTT TATTTTGTTC TAATGTTACC GTTTTAATGT GCCTAGGTCG 
    GTTTAACAGG TGTTTTAGAA GTTAAACCGG TGGAATATGT TAACACATCC 
    GAGATCAAAG AAGACGACAT CCATGGGACA ATCGTCGCGG ACAACACCAT 
    TGGAGTTAAC CACGACCATT TCGTGACATA CCGTCTTGAT CTTGACATTG 
    ATGGCACGGA TAATTCTTTN GTCCGTAGTG AACTTGNGAC CCANNAGGAC 
    NCCAAAATCT GTTAACACNC CTAGGAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11340218 [Map]; Strand: w
      • AT1G31670.1 - [+] show detail - Copper amine oxidase family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 12-4175-1 - 3-prime edge 
    CGGTCGTCAC CATCCGGACC ACAAGACTTA CGTCCGGTCT TACCTCTGTG 
    ATCTATACAT CAGCACTTAT TTAAATATAA AAGTTTTCCA TATTATATAT 
    CACTAATAAA TTGAAGAATT TAGTTGGGTA GATCTTGATA GTTTAATTTG 
    TTACTTTTAA GCCGGGAATT TCAATTTCGG TATGCCGCCA CATAATGTCT 
    CCGGCATATT TCTCGAAGAT GCACATAACA TTTGTGATTT TTATCGGAGT 
    TCCGTCTTGG CTTGCAAAGA CGCCGTCCAT GAAGGCAGCG TTACCGGGAC 
    AATCGGTGTA AGGTTCAAGA GACACAGCAT ATTGGCCGCA ACCAAATTCA 
    CCACAGTCAA AAAAAGTTCT GAAGTACCAA TCTTCACTTG GATC

AT1G31670.1

Model type
Protein coding
Short Description
Copper amine oxidase family protein
Computational Description
Copper amine oxidase family protein; FUNCTIONS IN: quinone binding, primary amine oxidase activity, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G31690.1); Has 1560 Blast hits to 1555 proteins in 278 species: Archae - 14; Bacteria - 380; Metazoa - 250; Fungi - 453; Plants - 252; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink).
Link
InterPro Scan - TAIR