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Mutant Lines
12-4189-1

12-4189-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 23441604 [Map]; Strand: w
- AT1G63206.1 - [+] show detail - Cystatin/monellin superfamily protein
  Distance: 673; Region: intergenic
- AT1G63210.1 - [+] show detail - Transcription elongation factor Spt6
  Distance: -2084; Region: intergenic

CTTTTANGCA CCAAAATCGT TTTTTACCTC GGGTTTTGCA TTTTTTTCTG 
ATAAAAAGTC TTCAAATTAA AATGCAAAAT GCCAGGTTAC AAGACCACAA 
CCTTTTGGTT GGATTGGATC ATGTGGTTTA GAGAGCGAAG AGATTAGTGT 
TACAGCTAAT CGAGAAACTG AATAACAACA TAAGGATGAG AAGATGAAGT 
AAAGAGGGGG AGTGCATGTG CATTCTAAAT TACTAGAAAA CACTAATTGT 
GATGACCACG GGTCCACGGC CTTCTCGTCC ACCAACACGA TTTGCATTCT 
TGAATGACCG TGCTTTCAAA ATTTGCGTGT ACGTAGCATG TGAACATATA 
GAGGGTTACA AACTTGTATC AGTACTCTTT AAAAATATCA ACATGTCATA 
GCATAAGATG ACAAAAGAGA AACGGTGTAA CAAACAATAT TGTTTTTGGT 
TATCGAGTGG AGATGATTAT ACTAATATAT TCTGCAGAAT CACTCTATTT 
TTGGACACCT TTTAGCCAAT TTTAGAACAA TATCTATTGG AACCCACCCT 
ACGACACTTC TTCACGAATT TCTAAAAAAA GAAAAAGAAT ACTTATACCA 
AAAGCTAATT TTGTTGAGTG TGATTTTCAA AAGTAAAATG GTTGAAAATT 
CAAGACACTT CTTTTCATGA GTTATTAATG CATATGCAAG CTCTATGTGA 
TTTTAGTCCG TTTGGGTTTT CTATACCTTT TTTCTCATTT TTCGTATATA 
GTAATAATCT GNGANAGCAT CTCCATTGCA TAACCTTTCA TANA

AT1G63206.1

Model type: Protein coding
Short Description: Cystatin/monellin superfamily protein
Computational Description: Cystatin/monellin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT1G63190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G63210.1

Model type: Protein coding
Short Description: Transcription elongation factor Spt6
Computational Description: Transcription elongation factor Spt6; FUNCTIONS IN: transcription elongation regulator activity, hydrolase activity, acting on ester bonds, RNA binding; INVOLVED IN: regulation of transcription from RNA polymerase II promoter, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process; EXPRESSED IN: sperm cell, flower, cultured cell; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Resolvase, RNase H-like fold (InterPro:IPR006641), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), SH2 motif (InterPro:IPR000980), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Transcription elongation factor Spt6 (InterPro:IPR017072); BEST Arabidopsis thaliana protein match is: global transcription factor group B1 (TAIR:AT1G65440.2); Has 3998 Blast hits to 3944 proteins in 1964 species: Archae - 20; Bacteria - 3376; Metazoa - 203; Fungi - 157; Plants - 65; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink).
Link: InterPro Scan - TAIR