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12-4213-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 46832 [Map]; Strand: c
      • AT4G00124.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -1462; Region: intergenic
      • AT4G00130.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -1434; Region: intergenic
    Flanking Genome Sequence: 12-4213-1 - 5-prime edge 
    ATTTTGAGTT AGATTTGTTT TAAGGAAATT ATTATATAAA CAATTTTATA 
    ATCTTGTTAG CAGGCTTAGT GTATATCAGT TTTCATTTTT GCGTCTACAA 
    AATCATAATC TCCGACGACA AAAATCGAAT AGAAAATCAT AATTTCTGAT 
    GACAAAAATC GAAACAAAAA ACAGTTATTT ATTCATTATT ACGTTAAAGT 
    TAGTAATTTT AATCGACTTA TTAGTAATTG TGTCTGTATT TTACNGTTTA 
    TGTTAGTGAT TTTAACCGAC TTGTTAGTAA ACTTTTTTTC ATTTTTCGTT 
    TATGTTAGTG ATTTCTACCC GTCCCCTCAA AAAGTACTAA CATGCACGTA 
    AAAATGAAAA AAAAATATCN CTANCAAGTC GATAAAAATC ACTANCATAA 
    TNTAAAANGA AGACAAAATC ACTAACAAGT CCATTAAATC ACTAACATGA 
    TCGTAAAAAT GAANATCTAA TCATTGTTNG TCGCCGAAGA TTATGATTTT 
    GGAGAAACAA AAAATGACAN CTGATGGCCN CTAATGGGAT AGGGAATATT 
    TATTTATTNC CAAAAAAAAT CATNCTAAAN TTTTGGAAAA TANAAAATTT 
    GGTNGNAAAN GGGNTCNTNA ATCNGATNGG GNTTAATTTN AATTAGGGGT 
    NAATNCAATT AAAAANTTTN NGNNGGGAAG GGGGGNNTCC AAATCNNNGC 
    NNGCGGNNAA ANTCCCCCCC GNNNC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 880965 [Map]; Strand: w
      • AT4G02010.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -125; Region: promoter
    Flanking Genome Sequence: 12-4213-1 - 3-prime edge 
    AAAAAAANTC NTTCGTGCGA CAAGANATCG TTTANCGTNC CCNACCGTNT 
    TNGTCCCTAC NCACTAANAT ACGCCGGTNA CGGNNAACAA ACATTANCNG 
    TAGCTATNNN CAAAAAGCNG TCACANTACA NNCAGCCAGN NNCTATNGGA 
    CNGCTCTNGT TANTATTNTG ATCCGTANAA AGTTNNAANG AAAACCAATG 
    TTAAACCGGA AAAAATAAAA AANANCTTNC TTACAATGGC NNTGGTNTCN 
    AACTCTTNAC NCNTNGTNNT CACGGNGAAN TGNTANTNNA ACATNTNCNA 
    AAGCNTCCAN CCNGGGCCNT CNACCATNCT TGGACNATAT GTNNCCANAT 
    NGANNAANTN CCCGNCANAG NANGCNGTNA GCNNGNTNNA AAGGTGGGNN 
    NGTNACAAAC AAACGGNAAN CTTTCCCCTN TTANGTAATA NAANAAGAAN 
    GAAACATNNN GCGNAGCCNA TTNACNNCTA NAAATTCNTN TGAGNNCNGN 
    GTANCNAAAN ANCGNNCCAN ANTTCNTANN GNNCAANNNA AANATNGNTN 
    AACNNNGGCG CCTTCANCNG NNNNNATNAT NTNANANTAN AAANANANAA 
    NACGTNANCA ANNAAACNGA AAAANCCCNC AGCACAACNA NCCANCANNA 
    AGCGAAGGCC NNCGNAGANT AANNTANCCC GGAAANNNGA GTGCNCGAAG 
    GGNNGNACGG ATAGNGACAN GATCTNANTG NNNATGCANN TCAANNTNGG 
    AANGCCNNAT CCANAAGACN ACNGNNCNAN NANCNNCTTT GNNCCNCCCN 
    NCNCCNNNNC ATGTANGNGN NNACCACCAC NCCNCNNNAT NTTTCGTNCC 
    CCCAANCCAN NTCCTNAACC NANCNNNNCG ANAAAACCGA TAACAANCCG 
    CNGAAACANC GNAAANAN

AT4G00124.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00130.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G25210.1); Has 94 Blast hits to 94 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G02010.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G20300.1); Has 117558 Blast hits to 116281 proteins in 4412 species: Archae - 107; Bacteria - 13740; Metazoa - 43399; Fungi - 9953; Plants - 33036; Viruses - 373; Other Eukaryotes - 16950 (source: NCBI BLink).
Link
InterPro Scan - TAIR