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12-4291-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18833654 [Map]; Strand: c
      • AT1G50820.1 - [+] show detail - Aminotransferase-like, plant mobile domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4291-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCNT 
    ACTGCATCAC CGTGAGAGCT GGGGNGGTTA CACNGGACAN TGATACATCT 
    CTGACTGCAT CNCAATACCT GNGAANCCTC TCNANTNNGA AAGTGATTGC 
    TTCCNCNCTG TNAATNCNAN CANNCTCAGA CACCTTGATG CATTCNGCNN 
    NCGAGATNNN NCCATCATCN NGGTTGGGAC CNGNANGCNC CNGNNTNGCT 
    CTCTCAGGAT NAAATNNNCG AANATCCCAG TTTGTTNNCA GCNTTANTGT 
    ATGGGCTCCA CTCAAAACTA TCCATTTTGG AGTTNTNGAA AATNCTNNNA 
    GCNTTGCTGG NTCTNTGTTT GATGTCNCAC CNCCGANCCN ATCTTGGCTC 
    ACCCGTTATC ACNAANAAAN GCNTTAGTTG TANTGCCCTG ANTCTNTCCC 
    NTGCCCNNTC TTGAACCAGN TTAANNNAAN CATNNANATN AANCTGTNCC 
    TTATTAANCG ATTAACTGAA NACTCTANNG TNGCCTTGCA NGAGACTTAG 
    GTCTGCATAC AAGTGTGCAA GAACANCANG AGCNAGAGCN NTCTTNNGTC 
    CACTNGANAG ATGAACAGCG ACTGGCTAAA TAGCTGCANA GATATGAAAT 
    AAGTGTGATG GANAGGCANA GTANCTNANC CNCNTGCNGN GAACCCACCC 
    TGCTCAAGCT TNNNNCNNCT GNNCNTGAAT NTNTNNNTNC ATNCTANTTN 
    GGNTANNGN

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18833442 [Map]; Strand: c
      • AT1G50820.1 - [+] show detail - Aminotransferase-like, plant mobile domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4291-1 - 5-prime edge 
    GNGNTAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAT CTTAGATAGC TGAGAATTCA ACAAACAAGA GACGAAAGTA 
    CATGAAGCAA GCTCATAGGA GTACAATGGG TCTTTGTCAG AAACAGGTTC 
    CATCAGACAA TGATGAAGAC GATGATAGCC TCACCGTTTC TCAAGTAACN 
    GGTGCNGTTA TAAGAAGAAG TATAGTGATA TTAAGTGTTA ATGTTTTGTT 
    ATGAAAGAAG AACAGAGTAA GAACGAAAAA ACAGAGTATG AATGTAATCA 
    ATCTTATTGA CTTGATTGTA TTACAAAACT CAATTGTTGT GTTGTGTTGC 
    AGAAACAAGA CTCGATCTTT ACTTATATGA AACGAAACAT TGTCTTGTGT 
    AAAAGACATG ACTCTTGATA AAAGACACAA CTCTTGATCT AAAGACACAA 
    CTGTAAAAGA CATGACTTGT GTCTCTTGAT CAAATAACTG ATTTATGTAA 
    ATAAACTATG ATGCGAGATT TGATTATACT TCAACACTCC CCCTTAATCA 
    TATCTCGGCT TCACTCCAAG CTTCCTTCTG AGATC

AT1G50820.1

Model type
Protein coding
Short Description
Aminotransferase-like, plant mobile domain family protein
Computational Description
Aminotransferase-like, plant mobile domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Plant mobile domain protein family (TAIR:AT1G50790.1); Has 564 Blast hits to 557 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 564; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR