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12-4399-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18835053 [Map]; Strand: c
      • AT1G50820.1 - [+] show detail - Aminotransferase-like, plant mobile domain family protein
        Distance: -192; Region: promoter
    Flanking Genome Sequence: 12-4399-1 - 3-prime edge 
    GTTGCAGGTT TGTGCTATAA TGGAATACTT CTTTTACAAT TAATAAAAAT 
    TCCCATTAGT AAAAGATAAA ATAATATTAT TTATCTTGTC AAAAATATTT 
    TAAATGTCTT ATCAGCCTGG AAAAATAATA TGTGTAATTA TTAATAACNG 
    TTAGAAGAAA AAAAATCAGA AGAAAAATGA TTTATAGAAA TGCGTTTACA 
    ATTTTCTTTT GTTTCATATT ATGTGATAGG CATTTACCAA AATGGAAATC 
    ATTGACCAAA CAGAGAAACT AGAAATTGAG TCAAATTTCT TATAAACCGA 
    ACGGTCTTTT AATTCTTAAA TATGATACCG GACTTTCCCG GAACTTTATT 
    TGAATAGTGA CCTCTCATAC GTACTCACTT TCTCTGCGCC TAATTCAAAA 
    GCATACGTAC TGATTCTCCA TTCCATGTAT TTCTAATTAC TAACACAATA 
    AATATTTGTG TCTGGTGAGT TCTTTACATA TGCAAAAGAG CAAAAGAGTA 
    AAAGAAAACC ACACCAAAGA TTGATATGTG TGACACTGTT GTTTTATTTC 
    CATGAGATCC TAAGCAGAAA CTCGACTTTT AATCTGGTTT CCTCTGATTT 
    TCCACTTTCT AATCATGGAC AAAGTCTTCT CCATCTCAAT CATNTGTGCC 
    TNAAGCTACC ANCCNGGGCC GNGACCACNC NGNCCCNT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 18834937 [Map]; Strand: c
      • AT1G50820.1 - [+] show detail - Aminotransferase-like, plant mobile domain family protein
        Distance: -76; Region: promoter
    Flanking Genome Sequence: 12-4399-1 - 5-prime edge 
    CCTGCAACAT GGATTCTTCG TGACTTGAGT TCAAACAAAC ATTAAACCAC 
    AAGGGAAAAA ATAGGAAAAG CATTTCATTT TGTCTTGTTT GAATCTTCTT 
    CGTCTCCATG AATTGAAGAT CCTTGTTGAA AAGAGAGAGA AGAGCTCATG 
    GCGTCTCGTA CCGAGAACAG TTGTAGCAAA AGAACCCATC TTTCAAAACC 
    TTGTCTCTCC TCCTCCATTG ATGGATTTGA AGATCGTCAG AATCGTTCTT 
    CAGCTCTTTC TGTTCACTTA AAGGCTCTTT CTACGAGTAT TAAATTCTGG 
    GGTTGGAGGT TTCCAAACAA AAAGTTCAAG TCTTGGGCTA GAAAAATGGC 
    ATCTTTGCAC GAACCCATTT GGAGAAAAGC TGGGATTTTT GAAGCTGTTA 
    TAGCTTCAAC ATACAAAATC CCTAAAGACA CAGATCTTGT TCTGGGTTTA 
    GCTGAGAAAT GGTGTCCAGA CACTAAAACC TTCATTTTCC CTTGGGGTGA 
    AGCAACTATA ACCCTTGAAG ACGTTATGGT GCTTTTGGGT TTCTCTGTTT 
    TGGGTTTGCC TGTTTTTGCC ACCGNGGATA GCTCAGGGAA GGAGATTATG 
    GCGAAGCTAG AGAAAGAATG GAAGAAGATT AAGAACGATA AAGTCTGTCT 
    GGTAACCAAA TTAGCATGGA TGGANAGATT CATGAACA

AT1G50820.1

Model type
Protein coding
Short Description
Aminotransferase-like, plant mobile domain family protein
Computational Description
Aminotransferase-like, plant mobile domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Plant mobile domain protein family (TAIR:AT1G50790.1); Has 564 Blast hits to 557 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 564; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR