1. Home
  2. Mutant Lines
  3. 12-4408-1

12-4408-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24129576 [Map]; Strand: w
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4408-1 - 5-prime edge 
    TATCTGTGAC GTTTGTGGGA AGAAATGCCA GTTTACGGCG TATGTATGTC 
    TTCAGTGTGA TTTTGTTACC GCAAGAAAGT GTATCGACAG GCCCCGTGTC 
    ATCAATATCA ATCGTCATGA TCATCGCATA TATTTAACTC ATCATCTCGG 
    CACTGGGTAT TCNGAATGCG GAGTTTGTCA CAAAAATGTA AGTCAGTACA 
    AGGGGGCTTA CTCTTGCTCT GTTTGCCCTA ACTATGCTGT TCATTCTACA 
    TGTGCCGTGA GAACTGACGT ATGGGATGGC GTAGAATTGG AAGGGACCAC 
    TGAGATCACA GAAGACATTT CACCATTCAA GGTGGTGGGT GATAACTTGA 
    TATGCCATTT TAGTCATGAA GAGCATCAAT TAAAGCT

AT5G59920.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Curator Summary
Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.
Computational Description
UV-B LIGHT INSENSITIVE 3 (ULI3); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR