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12-4471-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18228533 [Map]; Strand: c
      • AT4G39120.1 - [+] show detail - myo-inositol monophosphatase like 2
        Distance: -545; Region: promoter
      • AT4G39130.1 - [+] show detail - Dehydrin family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 12-4471-1 - 5-prime edge 
    GGGNNAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTCA ATGAGATTCA ATATCTGTAT CACTCGTAAG TAAGTTCTAA 
    AAGCATGTGA ACGCAATTGT CTAATAGTTT GCGAGTAGAA ATTCTACATC 
    CATTTCATTT TTATTTATGT ATGCGTGTAT ATTATTTTAA AAATTATTAT 
    CAAGATTCAC TGTCCATGGT ACGTATAAAA ATGTAGACGG AGGAGAATGG 
    CGAAGGAGTA GGGAGGAAAA CTAATATAAC GGATGAAACT AAATCGAAGC 
    TAGGCGTCGA CAAGCCATCA GCTGCGACCG TAACAGGATC AGGATCAGGA 
    TCGGTTCACG AGAAGAAGGG TTTCTTTAAG AAGATTAAGG AGAAACTTTC 
    TGGCCACCAT AATGATCTTT GAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18228589 [Map]; Strand: c
      • AT4G39120.1 - [+] show detail - myo-inositol monophosphatase like 2
        Distance: -601; Region: promoter
      • AT4G39130.1 - [+] show detail - Dehydrin family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4471-1 - 3-prime edge 
    AATCTCAATA CAACTATGTA ATAGATATTT AATCGTACCG AACTGGTGCC 
    GAACCAGCGG AGATCATGGT CTTGAAGAGG GTCGTGGGAC ACGGAAATAG 
    GTTGTGCGTG GTGAGGAGTA TTGGTGGTGG TGACTGGGGC AGTGATTGGG 
    TGTGGACCTG TGTAGCTGCT CTCCTTCAGG TGAGGAACGG TGGTTGCCAC 
    ACCTGTCAAA TGCATGGCGT TACCAAACTC GTCCATGAGC TGAGCTGGCT 
    CCCCGTGTGC GTCCGTGAGA TATATCGGAT TTCCTCGTTC GTCTTTCAGA 
    TCCGCCATTC TCTTTTCCTA ACACTATGCG TTTGCGTGAA CATTATATGT 
    ACTAAACATT AATCATCATT CATGTGCATG GTCATGACAC GTGCCGCAGT 
    AACGAATCAA GATGCGTAGG GTATTGCCAC TAAGCACATG CATGATCTTT 
    AACGAACGAC CGTAGTCGAT AATGATTGCT TGAAATCGAT TTCTCTGATT 
    TCTATATAAC CCATGTTTCA ATATTTGCTT AATATTGGTA GTAGAGAAAT 
    GATGGTGTAA TAATTCACGT ATAATATTTT AAAAGCT

AT4G39120.1

Model type
Protein coding
Short Description
myo-inositol monophosphatase like 2
Curator Summary
Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.
Computational Description
myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G39130.1

Model type
Protein coding
Short Description
Dehydrin family protein
Computational Description
Dehydrin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: dehydrin LEA (TAIR:AT2G21490.1); Has 170 Blast hits to 155 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 166; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR