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12-4489-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24470960 [Map]; Strand: w
      • AT1G65790.1 - [+] show detail - receptor kinase 1
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 12-4489-1 - 5-prime edge 
    ATCAACGATG TGGTAGTATC TAGGAGGGGT TACACATCCA AAGAAAAAAA 
    AAGTGAGTAC CTAGAGCTTC CATTGTTGGA GTTGGAAGCT CTTGCCACGG 
    CAACAAACAA TTTTTCTAAC GACAACAAGC T

AT1G65790.1

Model type
Protein coding
Short Description
receptor kinase 1
Curator Summary
An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain.
Computational Description
receptor kinase 1 (RK1); CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), S-locus receptor kinase, C-terminal (InterPro:IPR021820), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), S-locus, receptor kinase (InterPro:IPR022126); BEST Arabidopsis thaliana protein match is: receptor kinase 2 (TAIR:AT1G65800.1); Has 122289 Blast hits to 120537 proteins in 4566 species: Archae - 105; Bacteria - 13863; Metazoa - 44387; Fungi - 10421; Plants - 35006; Viruses - 434; Other Eukaryotes - 18073 (source: NCBI BLink).
Link
InterPro Scan - TAIR