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12-4493-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21469836 [Map]; Strand: c
      • AT1G58030.1 - [+] show detail - cationic amino acid transporter 2
        Distance: -1416; Region: intergenic
      • AT1G58037.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 3129; Region: intergenic
    Flanking Genome Sequence: 12-4493-1 - 3-prime edge 
    CTTAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ATATGACAAA CCAAAAGCGA CATATATATA GAGTATCCAA CATGCACCGT 
    TAAAAAGCTA CATTATTAAA AATAAGTACC TGATGATGAA CATTCACTAA 
    GCCGCCAAAA AGTAGAATGG AGAACGGAGA AACAGCGGTT GTATCTTGCN 
    TGATATACCA CTTTCTTTGT TTCGACCTAC AAGAACAAAT AAAATTTTAA 
    TATACATATT ATCTGTGCTT AGCTTTGTTT ACAAATTTTC ACCATAATCT 
    GCACATTCTA ACAATCAGAT GAAAATTATA TAATAAGAAG CTAAATCTGA 
    AATTCTGAGG CACATAAATA AGAGAGATAA AAACTAAACT CAACTGCTTT 
    TTTAAAGGAA TAAGTTGAGA AATGATACAT TTTTTGAATA TAATTATAAA 
    AGTAGTACGA GTACTATTCA TAATAGGTGA TTACCCCGGG ACCACCGTTC 
    TATGAGATAC AGAAGTCTTG AGATACAGAA AAATGGGCTA TATTCGCTTT 
    TGTGGAAATT ACGGTAAGGG GCTTCCTTTG TTTTACATAA AATCATTTCT 
    CACTAAAAGA ATAAAGAGGA GGTCTTATGG AGAGAGAGCC TGTGTGAGAG 
    AATCAGAGTA TAGGTGATGT NTNTTTATAT TNNCTTTNNC TNNATTCAAT 
    GANATNTCAT TCTCCCATAT TNTTAANAAA TNAAAATGCT CCTTTGNAAA 
    NTTTTATTTT TTTAAAGTNG ATCATATACC ATTTAAATCT ATGTTTTTT

AT1G58030.1

Model type
Protein coding
Short Description
cationic amino acid transporter 2
Curator Summary
Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.
Computational Description
cationic amino acid transporter 2 (CAT2); FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: plant-type vacuole membrane, plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 3 (TAIR:AT5G36940.1); Has 37076 Blast hits to 34712 proteins in 2307 species: Archae - 552; Bacteria - 29543; Metazoa - 2357; Fungi - 2838; Plants - 508; Viruses - 0; Other Eukaryotes - 1278 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G58037.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G45730.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR