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Mutant Lines
12-4494-1

12-4494-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 637423 [Map]; Strand: c
- AT3G02880.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
  Distance: 139; Region: intergenic
- AT3G02885.1 - [+] show detail - GAST1 protein homolog 5
  Distance: 598; Region: intergenic

GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTT TCATCCCTGA CGATATTCAT GACCACTTTT 
GTCGTTGACT TTGTTTTTGG CTCAAAATTT TGGACGGCGA TAAAAAATAA 
AACTCGTTGA CATTGTTTTT TTGGCTGAAT CGTTGACTAG GATTCTGGGA 
TAAGATGTGA AATGAAGAAA ACAAAAACCA ATTTATTCAG ACGCAATCAA 
CTATATATTT ATACAAAAAT TAGCAAAAGC AATAGTTTTA TAGACATTTT 
AAAAACTTTG GAAAGAAAGA AAAGTAGAAA GAAAGAAAAA AAGAAACTGA 
TAGGTCTCAT CTCAATTTGA GGCTCAAGAA TTAACGAACA AACTAGAACA 
AGAACAAAGA AGAAGAAGTA GAAAAAAGGC GGGAAGTGGG GTCGACACTA 
TTCAAGAAAT TGCAACTTGA CCCCAAACAA TATTCAAATC AATCAATTTA 
NACCCCCAAA AAATCAGTCG GATACAGGAT TTGGGGAGCC AGATGAATGA 
NAAACCTCCT CAATGAGTCT GGTGACTTCA GCCATCGAAG GACGACTATC 
TGGGAACTGA GCCGTACAGC TCATACCGAT CTTCAATAAA CGAATGATGT 
TCTCATTGCC CTCAGGTTGG TACCTTGTGA GCTCGGGATC AAGCACATCG 
GACGGNGTTT GTTGCTCGGT AACAGATTGG ACCCATCTCG GCAAATCTAC 
GCCTTCTTCA TTCAACTGCT GATGCGTN

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 637413 [Map]; Strand: c
  - AT3G02880.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
    Distance: 129; Region: intergenic
  - AT3G02885.1 - [+] show detail - GAST1 protein homolog 5
    Distance: 608; Region: intergenic
Flanking Genome Sequence: 12-4494-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCA 
CTACTCTCAC GATTGACTGA CAAATACTTC ACGATTTGAT TAGATTTGAA 
GTTTTATAAT GTGAAGTTGG TAACCACTAA CTAATAACCC TACTTCACAG 
GAGAAAGAAA AAACATTTTA GATATGAAAA AAACAACATT GACCCAGAAT 
GCNTTAGAGA TTATGTATGA AGGAATTACT AGTGCTGATA AACTATTTAG 
TTCAAGCT
```

AT3G02880.1

Model type: Protein coding
Short Description: Leucine-rich repeat protein kinase family protein
Computational Description: Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: anchored to plasma membrane, cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G16590.1); Has 140419 Blast hits to 103539 proteins in 3753 species: Archae - 105; Bacteria - 10616; Metazoa - 37369; Fungi - 7261; Plants - 69256; Viruses - 279; Other Eukaryotes - 15533 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G02885.1

Model type: Protein coding
Short Description: GAST1 protein homolog 5
Computational Description: GAST1 protein homolog 5 (GASA5); INVOLVED IN: response to gibberellin stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT1G74670.1); Has 468 Blast hits to 468 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 468; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR