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Mutant Lines
12-4498-1

12-4498-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 18071085 [Map]; Strand: w
  - AT4G38670.3 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
    Distance: 0; Region: intron1 (CDS)
  - AT4G38670.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
    Distance: 0; Region: intron1 (CDS)
  - AT4G38670.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 12-4498-1 - 5-prime edge
```
CAAACCGGGC CATATCGTGT TCCGGCAACG ATTCGTGATC TTGAACGAAA 
TTGGCTCAAC TGCTGCCATG TGAAACCAAT TCAATCAAAA TCGTGTAAAG 
ATTGTTAAAC TCGATAGTCA AGCAATAAAG AAGCAAGGAA TTAGACAGCG 
ATTATTGACC TGAAAGAGAT GAGACAAAAG CCAGGATCAT AAACAAGAGG 
ATC
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 18070969 [Map]; Strand: w
- AT4G38670.3 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.1 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)
- AT4G38670.2 - [+] show detail - Pathogenesis-related thaumatin superfamily protein
  Distance: 0; Region: exon2 (CDS)

CCGGTTTGCT CTCTGGTGCT AACTCTGCGC CGCTCCCCAC AACTGGCTTT 
CGTCTCTCTA GAGGAAAATC TAAAACCGTC GCAATACCAG AGTCGTGGTC 
CGGTCGTCTC TGGGCACGAA CCTTGTGTTC ACAAGATCGG AGTTCAGGTT 
CTTTCGTCTG CTTAACCGGA GATTGCGGCT CGGGAAAAGT CGAATGTTCA 
GGCTCCGGAG CTAAACCTCC AGCAACTCTC GCCGAGTTTA CTCTCAATGG 
CACAGGAGGA CTAGATTTTT ACGACGTTAG CCTCGTCGAC GGTTACAATC 
TCCCGATGCT AATCTTGCCC AAGAAAATCG TCATTGGAGG ATGCGGAGCC 
ACCGGGTGTC TCGTGGACTT GAACGGCGCG TGTCCCAGAG ACCTAAAGCT 
GGTGACGCGT GGGAATGGGA ACGGTGTTGC TTGCCGTAGC GCGTGCGAGG 
CATTCGGAGA CCCAAGGTAT TGCTGCAGCG ATGCGTACGC CACGCCGGAC 
ACGTGTCAGC CTTCGGTTTA CTCGCTCTTC TTTAAGCATG CGTGCCCACG 
AGCATACAGC TACGCCTATG ACGATAAGAC GAGCACTTAC ACTTGCGCCA 
CCGGAGCCGA TTACTTCATC ATCTTCTGTC CGCCACCGTA TACAAGGTGA 
GATATTGACC GTTTTGCCCC TCTGTTCGCT TTGGAATATG CTAGGGATGT 
TTCTTGGTNT TTANTATATG AGCAGGAATN TAATCTGANC CC

AT4G38670.1

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1594 Blast hits to 1578 proteins in 180 species: Archae - 0; Bacteria - 39; Metazoa - 54; Fungi - 72; Plants - 1416; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38670.2

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 1592 Blast hits to 1576 proteins in 180 species: Archae - 0; Bacteria - 39; Metazoa - 55; Fungi - 72; Plants - 1413; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38670.3

Model type: Protein coding
Short Description: Pathogenesis-related thaumatin superfamily protein
Computational Description: Pathogenesis-related thaumatin superfamily protein; INVOLVED IN: response to other organism; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT4G36010.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR