1. Home
  2. Mutant Lines
  3. 12-4517-1

12-4517-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22896651 [Map]; Strand: w
      • AT1G61930.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: 2675; Region: intergenic
      • AT1G61940.1 - [+] show detail - tubby like protein 4
        Distance: 748; Region: intergenic
    Flanking Genome Sequence: 12-4517-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACAAAATGA TTTTTGATAT 
    GATTCTTCAT AATAACAATT TACACGTTCA TTGACTTGAT GCTTTATAGT 
    TATCGATTCT CGAAGAACTA TAGTTACTTT TTAATTTTCA ATGGCTTAAA 
    AAATCAGAGA ATATATATTT GTTTATCTAC TTAATCTGCA TCTTGTAGGA 
    AAAATTTATT CTAAACATAT ACTATACATC CGACTTAAAA AATAAAGAAA 
    CATTATTCTC TAGAATATCT TTACAAAGAG CCAATGGTGT TCAATAATCA 
    AATATTGTCA CCTAAAGTTT CAACACTACA TATTCTATTT TATTTTTTCA 
    GTATTATTTG TAGAAAACTT ATAGACTCAA ATAGCTGAGT CCAGGTGCCT 
    CAATCAAAAC CTCCCAACCA TCATCCTCAA TATCCCGATA TTGATCACCA 
    TCGAGAACAA GTATGAGACT AAACAAGGAC AAAGACCATA GGTGTAAGTA 
    CGTTTTGGTT GAATAAGATA ATATTGAGAG GTTGTACTTG AGCAACCTTT 
    AAAAGATAGA ATCTTGATGT TTATTTTGTT TGTTAAGGGA TATATAATTT 
    TGATGTTACG TTTTTGGATT TGAACATTTA GTGGAGATGA AACGAAGAGT 
    AGTGAATACT CCAAGCTATG TTTCATCTCT CCTTCTCCAA GCCACCACAA 
    GAACCCTTTT CTCATGTCTG AGTGGTCAAA CNTACNTAAA TAGATAGAAT 
    ACGACTTGGN

AT1G61930.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF584
Computational Description
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT1G11700.1); Has 322 Blast hits to 321 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61940.1

Model type
Protein coding
Short Description
tubby like protein 4
Curator Summary
Member of TLP family
Computational Description
tubby like protein 4 (TLP4); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 436 Blast hits to 371 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 436; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR