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12-4531-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20698050 [Map]; Strand: c
      • AT1G55430.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4531-1 - 3-prime edge 
    CTATCGTGTC TGTAGTGTGC CTCAGAAGGC AAAGTAGCAC ATTTAATACC 
    CAAAAAGGAT TTGCATTTAA TGCATTCGAG AAAAAAGGAT GAACACTCAC 
    TAGTACCACA CCCCATGCAA ATACCTCCGG TAAAGTTGAA GAAGAGATCA 
    TGTGCATGAC AACCATGAAT TAGAGGATCT GGAAGGGAAG CGCACCTGAC 
    GTCTAGTAGA AATTCTTCAC AACCTTTTTC ATGGCATCTG TAGTGGAAAC 
    CACAACCATA TCGGAGGCAA CCTATACAAT TGAATATGAC TTTGGTAATA 
    GGCATATTCG GGTCCGTGTA GGTGTCAATA GTAGGGACGA CGTGGAGGGT 
    AAGTGGGTGT TTATGTAGTG GGTTGTATAT TTTGCGAGGA AGAGAAGCAC 
    ATGCTTCGTC GAGTACAAAA TCACACTCCA TACATCCATA AAATCTCTGA 
    GAGATCATTA CTGGAAGGGT GCATGCCTCA CAAAACTTGT CTTTCTCGGT 
    AATGGTTTTC TTTACATGGA GCTTCATATA ATGCTCATGA TGACTGAAAT 
    GTTGAATTGT GTCCTCATCA ATCTTCAGGA ATGGCGGTTC GATATACTCC 
    TCGGGTTCTT CAGGCACTCC ATCAAGATCT ATTCCATCCC ACACGTCTCT 
    CCATGTTGCA CATTTCGAAT GGATAGCATA TTGGCATNCC TTATCACAAG 
    AGTATTGCCC GCAGTTAACG TCAACTGTNT GGCGACA

AT1G55430.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT1G55420.1); Has 1374 Blast hits to 579 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1370; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR