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12-4591-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1004128 [Map]; Strand: c
      • AT4G02290.1 - [+] show detail - glycosyl hydrolase 9B13
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 12-4591-1 - 3-prime edge 
    GTTTGAGGAG GACTTTGGAG TAAGAAGGAT CAGATTTTCT GAATACAATG 
    GCGGCGGCGG CTAGAGCAGC GGCGGTTTCA GCGGCGACAT CAGAACCAGG 
    AGTGTTCTTG TCAACTTTAA ACACACTTCT TACAGTATCC ATGTCTTCTG 
    GTCTTTCCCA ACAAGAATGG TCTTTATTAG CATCACCAAC TTGAACATAG 
    ATTGTGTCAG GTTGTGAAGT GGCTTTGAGG AGATAATCAG TAGCCCAACG 
    AATCGCTATT TTAGCGTTTT GTAACTCAGA TTTCATGAGT CCACCGAATT

AT4G02290.1

Model type
Protein coding
Short Description
glycosyl hydrolase 9B13
Computational Description
glycosyl hydrolase 9B13 (GH9B13); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: cellulase 2 (TAIR:AT1G02800.1); Has 1736 Blast hits to 1717 proteins in 249 species: Archae - 2; Bacteria - 566; Metazoa - 187; Fungi - 17; Plants - 926; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Link
InterPro Scan - TAIR