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12-4727-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 461302 [Map]; Strand: c
      • AT4G01060.1 - [+] show detail - CAPRICE-like MYB3
        Distance: 228; Region: intergenic
      • AT4G01070.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: 290; Region: intergenic
    Flanking Genome Sequence: 12-4727-1 - 3-prime edge
    CAAATAACCT ACTTCAAAAC AAAACAAAAG TGGAAGTCGT TTTACAAGTC 
    ATAAAATGAC ATGCTGTCTT CAGGTCCCAC ACATGTTTTC TGTATATTTG
    TCGTTAACGC TATTTCACCT ACTCCACACA CACACNTTAT TTTCTTGGTC
    ATCCACGTTT TAGACTTTTA GTTTTTCCTT AAATCTCTGA TCCATAACCA
    CGAAACGGAC GATCTTCAAT CAAAACCCAT AACGTATCTC ATTACCAAAC
    AAACACATTG TTAACATCTA TGTCTCATTG ATGATCTAAT ATCTATGTTA
    CTTTTGAGAT TACAACAAGT GTTTAAAACT TAAACAAACG GTTATTTTAA
    CTATTGACGA TAGACGATGG ATGATTTTCT TGAACAATAT TTAACTATAA
    ATGCACCATA TTCTTCTAAG CTGATCTTAA ACTTACGAAT TAATCAACAG
    CCAAAAACAT ATACAAATAA AAGTTGAGAC AAACGAAGCA AAGAAAAGTA
    GAACATACAT ATACATACAG AAACACATTT GCACAAATCC CACCGTTGAT
    TATACAAATC ATATTAGAAC ATCAAATATT TAGTGGTTGC CATTTTGCTC
    TAACTCTTTT TTATGGGCTT TCCACTTTAA GGCCACAAGA TTAAGTGCTT
    TTGTCGAAGA CCCATCATCC TTCAACACCC TACAAGCTGC TTCCTTCAAC
    TCCTTNATNT TGTTCCTCAC TCCTTTGCCT T

AT4G01060.1

Model type
Protein coding
Short Description
CAPRICE-like MYB3
Curator Summary
Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.
Computational Description
CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 2727 Blast hits to 2727 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2715; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G01070.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Curator Summary
the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta
Computational Description
GT72B1; FUNCTIONS IN: UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: xenobiotic metabolic process, response to cyclopentenone, response to salt stress, response to toxin, xenobiotic catabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7551 Blast hits to 7483 proteins in 336 species: Archae - 0; Bacteria - 81; Metazoa - 2271; Fungi - 41; Plants - 5061; Viruses - 34; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR