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12-4732-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26618635 [Map]; Strand: w
      • AT1G70590.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4732-1 - 5-prime edge 
    TTCATGTCCT CCGTCTAATG AGTTCGGAGA TTTCTCGATG CTTCCGTATG 
    ATATACTGAT GAAGATCGCT GCACCGTTTA GTCATCCGAA TCTTCAAGCG 
    GCGTCTTTGG TATGTAAATC GTGGAGAGAC GCGCTAAAGC CGTTGCGAGA 
    GTCGATGTTG TTGATTCGGT GGGGGAAAAA GTACAAGCAC GGAAGAGGAG 
    GTGTGCGAGC GAATCTCGAC AAAGCTCTTG ATTCGTTTCT GAAAGGAGCT 
    ATGCGTGGAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26414908 [Map]; Strand: c
      • AT1G70140.1 - [+] show detail - formin 8
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4732-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCACCAC TGGTGGAACA 
    GGGGAGAGTG AAGAGATGGG GAAGAAAGTT TCGATATTTT GAGGAGAATC 
    AAATTGAGAA AGTAATTGGA ATGGTAAAAC GACGATGAAG AAGAAGTAAA 
    TTAGGGTTAA ATTAGGCCAT GGATGATTAA ACATGGCAGC CATTAACGAT 
    TTAGCTCATT TAGAGAGATA GAGAGAGATC AATAAAGGAA ACAAAAAAAA 
    AANTGAAACC CCNTCTTTGT TNANTTTTCT NCAANTTNCC ANTNCCCAAA 
    ANTCTCNGGA CCTTAAACCG GGAAAATANT TNAAATAANN NATNCTTTTN 
    GGNGGTTTNG GTTTANNGNG GANTTNAAAC CAAAANTTAG TGGANCNGTN 
    NTTNTTNTTT TTCCCGGGNC GGGNANAANT TTTGNGATNG NCAAAANTCC 
    CCTTNTTAGG GGGATNGGTT TNNCCCTAAN TNTANGGGGG TTTNAGGTAT 
    TTNNNCTAAA ATCGTTTNCG GNAAANGGCC TTTTTTGGAC CTGGGCCGGN 
    NNATGNGNGT TTTCNTNNAC TTTGCCCAAA ANNANGGGCN NCCCTNNTTT 
    TTNGNNCTNT TTNTAAAAAN NTTTTNNCCC CTTNGGANNT TTCCCCTNNN 
    NCCCNAAANC NTNCCCCTTT NNANNCNANN NNNNTTNNNN NCTTTNNNNC 
    CNNNNTTTTT TTTTTTGGNA AANNAANAAN TNNCNNNCCN G

AT1G70140.1

Model type
Protein coding
Short Description
formin 8
Curator Summary
Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton.
Computational Description
formin 8 (FH8); FUNCTIONS IN: actin binding, profilin binding, actin filament binding; INVOLVED IN: actin nucleation, cell tip growth; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homologue 4 (TAIR:AT1G24150.1); Has 22376 Blast hits to 12386 proteins in 831 species: Archae - 31; Bacteria - 2621; Metazoa - 7710; Fungi - 2231; Plants - 6132; Viruses - 1038; Other Eukaryotes - 2613 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70590.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: HCP-like superfamily protein (TAIR:AT1G18260.1); Has 16059 Blast hits to 6577 proteins in 1289 species: Archae - 0; Bacteria - 11525; Metazoa - 502; Fungi - 723; Plants - 391; Viruses - 15; Other Eukaryotes - 2903 (source: NCBI BLink).
Link
InterPro Scan - TAIR