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Mutant Lines
12-4735-1

12-4735-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 25144056 [Map]; Strand: w
- AT1G67210.2 - [+] show detail - Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC...
  Distance: 46; Region: intergenic
- AT1G67220.1 - [+] show detail - histone acetyltransferase of the CBP family 2
  Distance: -1531; Region: intergenic

GTGAAAAACT AACAAAATCG GTTATACGAT AACGACCGTT ACAAGATTTT 
TGTTTTGTTT TTGTGTTTGT CTCTCTACTA AAATTAGTAC GTGAATCTAG 
TTCGTTCCGA CACTCATTAA CGATAACATA ATAGTTAAAC TCGTTTAAAG 
TATAATAATG CTACACTATG ACACAAGCCA CCNGATCATA ATGAGAGAAT 
TTTTTTGTGT ATTTATATGA AAATCGAAAA AGATTTGGTG TATTTTTTTA 
TGTAGAATTT TCGCTATCGA GGGTTGTATT ACCGGAACGT TATATGTCCA 
GTAATAATAA CTACGTTTTG GTAATATGTT CCTAATTAAT CTGCAATCTT 
GTCTCTCCAT GTTTTCATAT CCACCATTTG GTATGGATTA TGGAAATCGA 
CTACTAATAA GTAACATAAT TCAAACTTCA TTTATGCTTC GAGCTCCATT 
TATGCTTCAC ACCATAAATT ATCGAAACAC TTCGTATCCA TTTAATAAAC 
TTAAAACAGA TAATTTGGAA AAGAATAATT TTTTTTTTTN TACCTAAANN 
TNTGGATTTC AANTCGAAAT TNCAAAGTTN NTNTNCAAAA NTTTCNANAN 
CAANTTNTAN CNTAACCTTT TTTTTNTTNC NCNTNTNTTT NAACTNAAAN 
TGGGNAAATN CNGCCAAANT NTTTTNTTNT AATTNTTATC TANAAATTNA 
NTCCCATAAA AAATTNGAAA TTNATTTTTT TNTTNCAANT AANAAACTNT 
NTTTTTTTTT ATTNCCCCCN CAAATNNGGG

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 25143998 [Map]; Strand: w
  - AT1G67210.1 - [+] show detail - Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC...
    Distance: 0; Region: exon10 (3UTR)
  - AT1G67210.2 - [+] show detail - Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC...
    Distance: 0; Region: exon10 (3UTR)
Flanking Genome Sequence: 12-4735-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTACAACAC 
CAAACGTGTA TAATCACGAT TCCAGTTTTA CGACCAAAGA CGTAAAAGTT 
CGATTCTGCC TTAAGCATAG ACTACTTTGG CTTAGGCCTG AATGTTTTAA 
CCGTAGTTGG CTTGTGGTTA ACTCTTTAAC TAATGGTTAT CATACATCCC 
ACATTCACTA ATGAATCTAT CTTCTGCTGC TAAAACTAAA ATGGATCTTA 
ACTCTTTCGG ATC
```

AT1G67210.1

Model type: Protein coding
Short Description: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Computational Description: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (TAIR:AT5G38600.1); Has 197 Blast hits to 197 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 6; Plants - 67; Viruses - 4; Other Eukaryotes - 16 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G67210.2

Model type: Protein coding
Short Description: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Computational Description: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: PSP, proline-rich (InterPro:IPR006568), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein (TAIR:AT5G38600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G67220.1

Model type: Protein coding
Short Description: histone acetyltransferase of the CBP family 2
Computational Description: histone acetyltransferase of the CBP family 2 (HAC2); FUNCTIONS IN: histone acetyltransferase activity, transcription cofactor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: shoot apical meristem, root, flower, leaf; CONTAINS InterPro DOMAIN/s: Histone H3-K56 acetyltransferase, RTT109 (InterPro:IPR013178), Zinc finger, TAZ-type (InterPro:IPR000197), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, ZZ-type (InterPro:IPR000433), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 1 (TAIR:AT1G79000.1); Has 1838 Blast hits to 1436 proteins in 226 species: Archae - 0; Bacteria - 234; Metazoa - 975; Fungi - 55; Plants - 202; Viruses - 0; Other Eukaryotes - 372 (source: NCBI BLink).
Link: InterPro Scan - TAIR