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12-4737-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18028932 [Map]; Strand: c
      • AT4G38552.1 - [+] show detail
        Distance: -440; Region: promoter
      • AT4G38560.1 - [+] show detail - Arabidopsis phospholipase-like protein (PEARLI 4) family
        Distance: -264; Region: promoter
      • AT4G38560.2 - [+] show detail - Arabidopsis phospholipase-like protein (PEARLI 4) family
        Distance: -266; Region: promoter
    Flanking Genome Sequence: 12-4737-1 - 3-prime edge 
    GCAGTACTCT CTCAGTCTCT TGTATGCATT GCAAAGAAAA AACAAAACAT 
    CCGTCTCCTT TCAGCCTCAG ATTTCAACAA TTTGTTCTTT ACTTCTGAAA 
    TTTCTTCATT TCGTGAATCC TTCAAGTCAA TTCTGTGTCG TGTTCTCAGA 
    CCTATTCATT CCATCACAAT CATCCATCTC AATTTCCTTC CTTCTTCCTC 
    TGAAACCTTT TGACTCTGTC TTTGGTTGTA AACTTCTTTG CTTTTTTCCT 
    GTTAGCGTAA ACCCTCACTT TTATAACAAC TTCTCACTTT CTTCGTGTGG 
    AGGATCTTTC CAGAGAGAGA GAGAAAGATA TACGCTTCTC TGTTAATTAG 
    TCAGGTTCTA AGTTTTGATC TCCAAGTCTC TGAGAGGGTA GTGGCATGTC 
    TGGAATAGTA CATCATGATT GTCCTAACTC AGGAAATCCC TACCACGAGT 
    GCCACGATCA GTGTTTCAAG AGAATAAGCT CCGGAGATGT CCCCAAGAAG 
    GAGAAAAAAC GGTTGGGTAA GAAGCT

AT4G38552.1

Model type
Other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G38550
Link
InterPro Scan - TAIR

AT4G38560.1

Model type
Protein coding
Short Description
Arabidopsis phospholipase-like protein (PEARLI 4) family
Computational Description
Arabidopsis phospholipase-like protein (PEARLI 4) family; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G20960.1); Has 264 Blast hits to 246 proteins in 47 species: Archae - 11; Bacteria - 15; Metazoa - 37; Fungi - 3; Plants - 167; Viruses - 2; Other Eukaryotes - 29 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38560.2

Model type
Protein coding
Short Description
Arabidopsis phospholipase-like protein (PEARLI 4) family
Computational Description
Arabidopsis phospholipase-like protein (PEARLI 4) family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G20960.1); Has 230 Blast hits to 212 proteins in 41 species: Archae - 11; Bacteria - 15; Metazoa - 19; Fungi - 1; Plants - 163; Viruses - 2; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR