1. Home
  2. Mutant Lines
  3. 12-4750-1

12-4750-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21911237 [Map]; Strand: w
      • AT1G59640.1 - [+] show detail - BIG PETAL P
        Distance: -36; Region: promoter
      • AT1G59640.2 - [+] show detail - BIG PETAL P
        Distance: -36; Region: promoter
    Flanking Genome Sequence: 12-4750-1 - 5-prime edge
    CTGTGGAGTC TGTGATTGCG TTACTGTGTT CTTGTTAATA AATTAATAAC 
    ATTCCCAACA TTTTTAAATA TAAAAATATT ATTATTTTAT TCAAGTTTTC
    AGACATAAAT ATTTTTTTTT NCCNGTTNCT NGNNCCTCGG GANCTNCGGG
    GTTNATNANC TTTNACTTNA NGGCNAGGTT NCCTNACTCT NACCNATCGT
    NNACTTNNAT CTTNNGCNAC NCNAGNGTNC CTACCCNGCT CTNANGCTNA
    CNGTTGGATN ATTNAAAATC TNAATCNACG GGGGTTAAGN NAAACNCNTA
    NGGCTNTGNG NNANAANGGN AAAAAANCNT CCTTTNTNAA AANGGAAAAG
    GACTNGGGGG AAGGGGGGAC CCNCNTNTGT TCCAANAATC NGTTTTGGGG
    TTAAGNAANN ACCTTTNTNG ATTAGGGANG GGCAATGANG GGGTNGGGGA
    TTTTAATNAN GNGNAAGTAA GGATNATGGA NGGATAANCC NATTTGGNAT
    TTTTCCATTN CTNAACTTTA AGGNCTTNCA ATTTTTTTTN ACANAATTAT
    ANCCTTNTTT TTTTNGGCCA TANCNCCNTA NNCNANCCCN NNCNNNANTN
    TNGNNAAAAA GGGGAAAAAC NTNNTNAATN CCNNCCNNNN NAATAAAANN
    NNGNNNNANN CCNNAANNNN GNNNNAAAAN NNNNNNNNTN NNTTNNANNC
    NAAAAN
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 21911121 [Map]; Strand: w
      • AT1G59640.1 - [+] show detail - BIG PETAL P
        Distance: 0; Region: exon1 (5UTR)
      • AT1G59640.2 - [+] show detail - BIG PETAL P
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 12-4750-1 - 3-prime edge
    CTCCACAGTC CAAGGAGTTT TGCATACTCA CCAAGCCACA ATCATTTCTC 
    TCTTCTCTAT CTCTCTGGTT TTGAATCGGC GACGACTGAG TCAACTCGGT
    GTTGTTACTG GTTTCGTCGT ATGTGTTGTA ACNTGATTAA GTTGATGGAT
    C

AT1G59640.1

Model type
Protein coding
Short Description
BIG PETAL P
Curator Summary
A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.
Computational Description
BIG PETAL UB (BPEub); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: petal morphogenesis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G62610.1); Has 2426 Blast hits to 2417 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 160; Fungi - 48; Plants - 2216; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G59640.2

Model type
Protein coding
Short Description
BIG PETAL P
Curator Summary
A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.
Computational Description
BIG PETAL P (BPEp); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: petal morphogenesis, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G62610.1); Has 2416 Blast hits to 2408 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 166; Fungi - 35; Plants - 2213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR