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12-4833-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 20020917 [Map]; Strand: w
      • AT1G53640.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 12-4833-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG CCTCCACACC CACCACCACC ACCACACCCA 
    CCTCCGCCGC AACAACAGCC TCTGGTCTTA CTTTTTTCCG AAGACGACAC 
    AACAACAAGA CCTCCATCTT TTTTTCCCGT CGTTTCACCT TTTTTGACGT 
    TATCTTTTGG AGGAGATGAC TTCCCCTCCT CCCCCTTGTG ATAGCATAAG 
    AGAGCACCCA TCGCTATGGC CTGGTTTAGA AGGATTATAA TGGCAACAAT 
    ACTTATGAAC CTTTTTGTGT CTTTAAATTT TTCTGAAAAT GTAATATTGA 
    TGCAAATATG AAATAGTGTC CATCCATATA TAAATAGGTC TAAGTATCCG 
    TTGACATTAA ACATAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25648967 [Map]; Strand: w
      • AT5G64090.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-4833-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT CATTGAAAGA GGATGAATCT CCAAAACCAT 
    TAGTTAGTGC TAAGACTTTG TCTTCGTCTT CATCGATCTT TTCCTTGCAA 
    TCGCAGTCTT GACCAGCCCA ACTAGCAGAG AACTTACAGA ATT

AT1G53640.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 1186 Blast hits to 678 proteins in 89 species: Archae - 0; Bacteria - 50; Metazoa - 731; Fungi - 92; Plants - 226; Viruses - 4; Other Eukaryotes - 83 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64090.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR