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12-4902-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17955254 [Map]; Strand: w
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 12-4902-1 - 5-prime edge 
    TGCTTGCATC ATCTCTTTTA GCCAACTCTG CCTCATAATT ACTTTCTATA 
    GGAGGCCAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17955138 [Map]; Strand: w
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 12-4902-1 - 3-prime edge 
    TGCAAGCATG TGGTTTGATA GGCTCTCCTT CCTTGGTTGT TCAATATCAA 
    ACGCCAACGA CTCCCTCCCT TTTTATTATA TTATGTCAAA CAGAAGAGCT 
    GCCAAAATGG GATAAGTCAG CAGCCTAAAA TAAAAACCCA ATTGCCCACA 
    AGGTCAAACC CCATAGCTTG TTTTTTTTTA TAAATGTTTG ATGGATGGAT 
    TTGGAGCCGA CCTCATCTGA ATCTTACTAA TCCATTACAT ATATCGGCCA 
    GTTACAAATA TTATATATCA AAGATAACAA GAACAATATA TACACACAAA 
    AAAATGTAAA AGACAGAGAG AATATGTAAT GTGTAGAGAG AGAGAGAGAT 
    GAAGCAAGTA ANAGAGGATG ATCCTTGTTT GTTTTCTTGA AAAATCATCA 
    ACAACTGGAT C

AT4G38340.1

Model type
Protein coding
Short Description
Plant regulator RWP-RK family protein
Computational Description
Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G76350.1); Has 720 Blast hits to 573 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 7; Plants - 646; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR