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Mutant Lines
12-4931-1

12-4931-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 17903887 [Map]; Strand: w
- AT4G38160.3 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon4 (CDS)
- AT4G38160.2 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon3 (3UTR)
- AT4G38170.1 - [+] show detail - FAR1-related sequence 9
  Distance: -671; Region: promoter

AGTCTAGCTG CTTGTCGGAA GTATGGGTGG GTAAAAAGCC CCTAGTCATT 
CCACAAATAT GGAGGCCCCT AGTCAAAGGT CACATTTGAT GACAAAGAGA 
TGGTTGATCG TTCTCTGCCT ATATAGTATG TACCTGTCAT ATAAAAATGA 
GACCCCCTCT GCTCTCTCTT TTGGATGAGA TCAACCGTAT TTTAAACCGG 
CCAAACTTGA AAGTTTTTTT TTGCTTCAAA TGCTCTTTCA AGTANAGTCC 
CTTTTGTTAT TCACGTTTTG TAGCTATTCT ATTCTCTCTC CTTGGACTGG 
NGTTTTTGTT CTTCGGTTTT TCCGATCAAA GTTGAATCAA NAANAAGTTC 
GATATGTCCG TCTTCGCTGT TTCTTGTGGT TGCTTGTTGG GCTTCTGTGC 
CTTTTTGATT TTTTCTATTT TGGGCCTGTG TGCCATGTTT TNGGCATTTC 
TGCTTTGTTG GGCCTACGTG CCTTTTCNAG CCTTGTAGTT TTNTTTGTTT 
AAAGCACTCA ATAATTGTTT GTTGACGGAC CAAAAAACTC AAATAGGCCC 
GACTTAATTT ATTATTTTAA GGGCCCAAAA TTAAGGACTA GGCCTGCCTA 
CCANTCCCAA CTNNCAACAT TGGTTATGGT AAACTAACAG CTTGCCGTTT 
TATGTTNTAA AAACGGNAGG AAAGTGTAGG CTTAAATANA CAAACCCCGN 
CCCGAC

3 prime edge [+] show sequence

Chromosome: 4; Position: 17903771 [Map]; Strand: w
- AT4G38160.3 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: intron3 (CDS)
- AT4G38160.2 - [+] show detail - Mitochondrial transcription termination factor family protein
  Distance: 0; Region: exon3 (CDS)
- AT4G38170.1 - [+] show detail - FAR1-related sequence 9
  Distance: -787; Region: promoter

GCTAGACTGC ATTGCTGCAT ATTCTGTTCT GCAGTTAGGC TAAGCAGACA 
CTTCTTTTGC TTGTCGGTTG CTGCAATAAT CACAAGCCAA TAATGACACT 
GACTTATCCA ACAACATATA CATCCCATTT TGATTGCAGT TGAATACCTG 
AAAACACAGG AACCACTCTA TGGATATGCA CTTGATCGGG CCATGGTGGT 
GGTTCTATCA TAATTAGGTG ATTTTCAAAA GGAAGTGTAG AATCCATGAT 
AAACGAATGC ATAGTGAATA ATCGATGATA TCTGGAAGAA AACACTCTAT 
TGATATCACA ATCACTCAAG GAAAAGCTCG TGCTAGAAAT TGGTGCACAA 
GCTGAAAACA GCTTACAGAG AGAGCCTGAT GAAGGAAAAA ACTAGAGAGA 
GATATAAAAG CTAGAAGCT

AT4G38160.2

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38160.3

Model type: Protein coding
Short Description: Mitochondrial transcription termination factor family protein
Computational Description: pigment defective 191 (pde191); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT2G21710.1).
Link: InterPro Scan - TAIR

AT4G38170.1

Model type: Protein coding
Short Description: FAR1-related sequence 9
Computational Description: FAR1-related sequence 9 (FRS9); FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to red or far red light; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PMZ-type (InterPro:IPR006564), MULE transposase, conserved domain (InterPro:IPR018289), Zinc finger, SWIM-type (InterPro:IPR007527); BEST Arabidopsis thaliana protein match is: FAR1-related sequence 5 (TAIR:AT4G38180.1); Has 1073 Blast hits to 1051 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1067; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR