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Mutant Lines
12-4955-1

12-4955-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 7053486 [Map]; Strand: c
- AT4G11670.1 - [+] show detail - Protein of unknown function (DUF810)
  Distance: -395; Region: promoter
- AT4G11680.1 - [+] show detail - Zinc finger, C3HC4 type (RING finger) family protein
  Distance: 0; Region: exon5 (3UTR)

GGTTTACGAT TTTCAAATAT CTTTTTGATT TTGTAATTAA TAAACGAGAA 
ACACAAAGCT CAGTTGTTTC CACGTTCCAC ACCAAGAAAA TTAAAAAATA 
AAGTAGGACT AATCCAACGA TTTATTCCTA CATACTATCA ATAGGCGCAT 
TGACGCATTG TAATAGAAGA TCAGGAGAAA GAGATATGGA CTAGATTTTC 
TAACTGCACA ACACTAAAAC ACGAACCAGA GTTTACATAT ATCTGAAACG 
TTCTGGTCTG GGATGGTTCG TTCGGATTGA TCCTAGAACC AGAACAGATT 
TTACTAGACT TCGTTGTTTG CGTTCTTCAA GATGTTAAAC TTGCAGAGCG 
GGCAACGTGA GTTTATATGA AGCCATTTAT CGATGCAAGT GCAATGAAAG 
TGATGGTTAC AAGGGAGTTC TCTAAGTTCA ACTCCATCTT CATATTCACA 
GAGACAGATG CAGCATTCCT GCAGAATCAT AAGAAGCCAT GCGTTATCAA 
TTTTACACAC TTTCAAAATG TACAACTTGA TAAGAATGTG GAAATGGGAT 
TGTACCGCGT CTTCTGGAGA AAGCGAGCGT TCAATAGGTG AATCTGTTCC 
ACATTCCGTC ATTATTCCCC GTGCTTTGCC TGAGAGCTTT TCAACATTGC 
CAGTTTTTGT AAATCTGAAT TTCGGCATTT GATCTATGTC GTTCTTCGAT 
GCTCCCTCCT GTTTGCGCAA CA

AT4G11670.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF810)
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT5G06970.1); Has 193 Blast hits to 179 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 166; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G11680.1

Model type: Protein coding
Short Description: Zinc finger, C3HC4 type (RING finger) family protein
Computational Description: Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G12760.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR